Miyakogusa Predicted Gene
- Lj2g3v2748710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2748710.1 tr|G7KH13|G7KH13_MEDTR Receptor kinase-like
protein OS=Medicago truncatula GN=MTR_5g082630 PE=3
SV=1,75.97,0,Protein kinase-like (PK-like),Protein kinase-like domain;
RCC1/BLIP-II,Regulator of chromosome conde,CUFF.39227.1
(2397 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318019 similar to UniRef100_A7Q3H9 Cluster: Chromosom... 367 e-100
gnl|LJGI|BP063009 similar to UniRef100_A7Q3H9 Cluster: Chromosom... 135 1e-30
gnl|LJGI|AV422659 weakly similar to UniRef100_A7NYE5 Cluster: Ch... 70 7e-11
>gnl|LJGI|FS318019 similar to UniRef100_A7Q3H9 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 800
Score = 367 bits (185), Expect = e-100
Identities = 487/587 (82%), Gaps = 3/587 (0%)
Strand = Plus / Plus
Query: 1366 tcaaggataatgcggcggcagaggagcggaacttcatcaacaaaacatcctgacagggca 1425
||||| || ||| |||| ||||| || ||||| |||||| |||| || || || || |||
Sbjct: 211 tcaagaatcatgaggcgccagagaagtggaacctcatcagcaaagcacccagaaagagca 270
Query: 1426 gaggagttcaccctggctgagcttgctgcagccactgacagtttctcactagagaacaag 1485
||||| |||||||| |||||||||| ||||||| ||| ||||||||| |||||||||
Sbjct: 271 gaggaattcaccctttctgagcttgcatcagccaccaacaatttctcactcgagaacaag 330
Query: 1486 attggttctggaagctatggtgttgtgtataaaggcaagcttgctgacggccgcgaagtg 1545
|||||| ||||||||||||| |||| || | | || || || |||||||| || |||
Sbjct: 331 attggtgctggaagctatggcattgtctacagggcgaaactcgcagacggccgtgaggtg 390
Query: 1546 gcgatcaaaaggggtgaaacctgtaccaagaagatg---tttcaagagaaagagagtgca 1602
|||||||| |||| ||||| || | ||||||| | || ||||||||||||| ||||
Sbjct: 391 gcgatcaagcggggagaaactggttcgaagaagaagaagttccaagagaaagagactgca 450
Query: 1603 tttgagtcagaattggaattcttgtctcggcttcaccacaagcacttggttaggctagtt 1662
|||||||| |||||| ||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 451 tttgagtctgaattgtccttcttgtctaggctacaccacaagcacttggttaggctagtt 510
Query: 1663 gggttctgtgatgaaaaagatgaaaggctcttagtctatgagttcatgaagaatggggca 1722
|||| |||||| || |||||||| |||||||| || ||||||| |||||||||||| |||
Sbjct: 511 gggtactgtgaggagaaagatgagaggctcttggtgtatgagtacatgaagaatggagca 570
Query: 1723 ctgtatgatcatttgcatagcaaagacaatgtggacaagaacagcagtgtgttgaataaa 1782
|| |||||||| ||||||| |||| | |||||||| |||| ||||||||||||||| |
Sbjct: 571 ctctatgatcacttgcataacaaaaataatgtggaaaagagtagcagtgtgttgaattca 630
Query: 1783 tggaaaatgaggatcaaggtcgcgctggatgcttcgcgaggaattgagtacctccacaac 1842
|||||| ||||||||||| | || | || ||||| || || || ||||| |||||||||
Sbjct: 631 tggaaagtgaggatcaagattgctttagacgcttcccgggggatagagtatctccacaac 690
Query: 1843 tatgcagttccatccattattcacagagatatcaagtcctccaacattctcattgacgga 1902
|| ||||||||||| || |||||||||||||||||||| |||||||| ||| | ||||
Sbjct: 691 tacgcagttccatcgataattcacagagatatcaagtcttccaacatcctcctcgacgcg 750
Query: 1903 aattggacagcaagagtgtctgatttcggattatcattgatgagtcc 1949
|||||||| || |||||||| ||||| ||||| || |||||||||||
Sbjct: 751 aattggactgcgagagtgtccgattttggattgtccttgatgagtcc 797
>gnl|LJGI|BP063009 similar to UniRef100_A7Q3H9 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 468
Score = 135 bits (68), Expect = 1e-30
Identities = 272/341 (79%)
Strand = Plus / Minus
Query: 2006 atcctgaatattatggtctaaatgtgttgacagcaaagagtgatgtctatgggcttggag 2065
||||||| || ||||||||||||||| |||| || ||||||||||| ||||| ||||||
Sbjct: 468 atcctgagtactatggtctaaatgtgctgaccgcnaagagtgatgtgtatggtcttggaa 409
Query: 2066 tggttttgctggaactgttaacaggaaagagggctatattcaggaatggtgagaatggag 2125
| || |||| ||||| ||||||||||||| |||||||||| | ||||||| ||||| |
Sbjct: 408 ttgtgctgctagaactattaacaggaaagaaagctatattcaagcatggtgaaaatgggg 349
Query: 2126 acaccccagtgagtgtggtggactttgcagtgcctgtgatcatgaccggggaattggcga 2185
|| ||| | ||| ||||||| | ||| || ||| || || |||||||||||| ||
Sbjct: 348 gaacgccactcagtttggtggattatgctgttccttctattttggccggggaattggtga 289
Query: 2186 aaatcttggatccccgggtcgctccgccggagctgaatgaaacagaagcagtggagcttg 2245
| | |||||||| | || | | |||||| |||||||| |||| || |||||| | |
Sbjct: 288 aggttttggatccgagagttgncacaccggagatgaatgaatcagaggcggtggagttgg 229
Query: 2246 tggcctatactgctatgcattgtgtgaatttggaagggaaggataggccaacaatttctg 2305
|||| || |||||| ||||||||||||||||||||||||| |||||||| || || | |
Sbjct: 228 tggcttacactgctttgcattgtgtgaatttggaagggaaagataggccnaccatggcag 169
Query: 2306 acattgtggcaaatttggagcgcgctttgtctctctgtgat 2346
| |||||| | ||||||||| | ||||||| ||| ||||||
Sbjct: 168 atattgtgacgaatttggagagggctttgtttctttgtgat 128
>gnl|LJGI|AV422659 weakly similar to UniRef100_A7NYE5 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 467
Score = 69.9 bits (35), Expect = 7e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 223 tcgttttcctcgatctccggcgggaggagctacttctgcggtctccggtccggcaactac 282
|||||||| || ||||||||||||||||||| ||||||||| ||| ||||||| ||| ||
Sbjct: 305 tcgttttcttccatctccggcgggaggagcttcttctgcggcctcaggtccggtaaccac 364
Query: 283 agc 285
|||
Sbjct: 365 agc 367