Miyakogusa Predicted Gene

Lj2g3v2736600.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2736600.1 Non Chatacterized Hit- tr|F6I4J6|F6I4J6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.8,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.39223.1
         (1686 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78444 similar to UniRef100_A7Q3F2 Cluster: Chromosome...   549   e-155
gnl|LJGI|TC81550 similar to UniRef100_A7Q3F2 Cluster: Chromosome...   109   6e-23

>gnl|LJGI|TC78444 similar to UniRef100_A7Q3F2 Cluster: Chromosome chr13 scaffold_48,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_48, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 695

 Score =  549 bits (277), Expect = e-155
 Identities = 292/296 (98%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1392 ctcaaagaaatccttggatatggctattaggcatatggaaataagacaacgggctccagg 1451
            |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1    ctcaaagaaatcnttggatatggctattaggcatatggatataagacaacgggctccagg 60

                                                                        
Query: 1452 aaatttacggcggccattaatgactaacattccagcatcttcaatgtatagtgtgcggtc 1511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aaatttacggcggccattaatgactaacattccagcatcttcaatgtatagtgtgcggtc 120

                                                                        
Query: 1512 aagtcctcggcatagccaaactgtcagttactcaggctcacctcatgccactagcagtaa 1571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aagtcctcggcatagccaaactgtcagttactcaggctcacctcatgccactagcagtaa 180

                                                                        
Query: 1572 tgctggttctgaggtgagtgtagaccaaaatggtctttgtatctataatgaaacagatga 1631
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181  tgctggttctgaggtgagtgtagacccaaatggtctttgtatctataatgaaacagatga 240

                                                                    
Query: 1632 tgatattgtcggtgagagaggtgatcgatctccttcca-gtgttcgatacaggtaa 1686
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241  tgatattgtcggtgagagaggtgatcgatctccttccacgtgttcgatacaggtaa 296


>gnl|LJGI|TC81550 similar to UniRef100_A7Q3F2 Cluster: Chromosome chr13 scaffold_48,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_48, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (25%)
          Length = 708

 Score =  109 bits (55), Expect = 6e-23
 Identities = 157/187 (83%), Gaps = 8/187 (4%)
 Strand = Plus / Plus

                                                                        
Query: 1326 tccccatagtaatctgcctggcaagccatcttcatccccagacaactctggttttggaag 1385
            ||||| |||||||||| |||||||| ||||   ||| ||||| |  || ||||| |||||
Sbjct: 88   tccccgtagtaatctgtctggcaagtcatc---atctccagatagttcaggtttcggaag 144

                                                                        
Query: 1386 atcactctcaaagaaatccttggatatggctattaggcatatggaaataa-gacaacggg 1444
            | ||||||||||||| ||||||||||||||||||||||||||||| |||| || |||   
Sbjct: 145  aacactctcaaagaagtccttggatatggctattaggcatatggatataaggagaac-ta 203

                                                                        
Query: 1445 ctccaggaaatttacggcggccattaatgactaacattccagcatcttcaatgtatagtg 1504
             |||||| ||||||   |||||||||||||| || ||||||||||| || ||||||||||
Sbjct: 204  ttccaggcaattta---cggccattaatgacaaatattccagcatcgtctatgtatagtg 260

                   
Query: 1505 tgcggtc 1511
            || ||||
Sbjct: 261  tgaggtc 267