Miyakogusa Predicted Gene
- Lj2g3v2724450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2724450.1 tr|F2D9U8|F2D9U8_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,46.77,3e-18,no
description,Tetratricopeptide-like helical; TPR-like,NULL; NOVEL
PROTEIN (FRAGMENT),NULL;
TETRATR,NODE_66141_length_1656_cov_7.674517.path2.1
(1296 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74161 weakly similar to UniRef100_A7NYI9 Cluster: Chr... 460 e-128
gnl|LJGI|BW600174 similar to UniRef100_A1WK73 Cluster: Response ... 100 4e-20
gnl|LJGI|GO011742 weakly similar to UniRef100_A7Q3D8 Cluster: Ch... 100 4e-20
>gnl|LJGI|TC74161 weakly similar to UniRef100_A7NYI9 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 492
Score = 460 bits (232), Expect = e-128
Identities = 239/240 (99%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 1058 agtacttcaagagatctgtgctggaggagccgccagatgctgaggcattcagtcgatatg 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 agtacttcaagagatctgtgctggaggagccgccagatgctgaggcattcagtcgatatg 64
Query: 1118 ctgatttcctgtggttggtaagaaaggatcttgaggcagcagaacttagataccaggaag 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ctgatttcctgtggttggtaagaaaggatcttgaggcagcagaacttagataccaggaag 124
Query: 1178 cattggaagaagaacccagaaacacttattacgcatcgaagtatgctaatttcctttgga 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cattggaagaagaacccagaaacacttattacgcatcgaagtatgctaatttcctttgga 184
Query: 1238 gcactggtggaaaagatacttgttttccacttgaatcccctgat-aactttccaccataa 1296
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 185 gcactggtggaaaagatacttgttttccacttgaatcccctgataaactttccaccataa 244
>gnl|LJGI|BW600174 similar to UniRef100_A1WK73 Cluster: Response regulator receiver
protein; n=1; Verminephrobacter eiseniae EF01-2|Rep:
Response regulator receiver protein - Verminephrobacter
eiseniae (strain EF01-2), partial (5%)
Length = 445
Score = 99.6 bits (50), Expect = 4e-20
Identities = 125/142 (88%), Gaps = 6/142 (4%)
Strand = Plus / Plus
Query: 1160 aacttagataccaggaagcattgg-aagaagaacccagaaacacttattacgcat-cgaa 1217
||||| |||||||||||||||||| || ||||||||| |||||||| |||||||| | ||
Sbjct: 99 aactttgataccaggaagcattggtaataagaacccataaacacttcttacgcatgctaa 158
Query: 1218 gtatgctaatttcctttggagcact-ggtggaaaagatacttgt-tttccacttgaatcc 1275
|| ||| |||||| | |||| |||| || |||||| |||||||| |||||||||||||||
Sbjct: 159 gt-tgcgaatttcatgtggatcactcggaggaaaatatacttgtgtttccacttgaatcc 217
Query: 1276 cctgat-aactttccaccataa 1296
|||||| |||||||||||||||
Sbjct: 218 cctgataaactttccaccataa 239
>gnl|LJGI|GO011742 weakly similar to UniRef100_A7Q3D8 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 621
Score = 99.6 bits (50), Expect = 4e-20
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 911 agcttgaaggggatcagtatgaggaatatgtcaaaaca-aggctttattacagaaagcat 969
|||||||||||||||| |||||||||||| ||||||| |||||| ||||| ||| | |
Sbjct: 469 agcttgaaggggatcaatatgaggaatatctcaaaactgaggctt-attaccaaaaactt 527
Query: 970 ttacgccaggcaccttacaattctcttctgctgtctaactatgcacagttcctttatctt 1029
||| | | ||||| ||||||| |||||||||||||||||||| |||||||| | ||
Sbjct: 528 atactcttgacacctcacaattcacttctgctgtctaactatgctcagttcctcttccta 587
Query: 1030 gtcgttcatgaccttgatggggcagaagagtact 1063
|| |||||||| |||||||||||||||||||||
Sbjct: 588 gttcttcatgacattgatggggcagaagagtact 621