Miyakogusa Predicted Gene
- Lj2g3v2703350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2703350.1 Non Chatacterized Hit- tr|I3SNM9|I3SNM9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.65,0,seg,NULL;
JAB/MPN domain,JAB1/Mov34/MPN/PAD-1; JAB,JAB1/Mov34/MPN/PAD-1;
MitMem_reg,Rpn11/EIF3F C-te,CUFF.39213.1
(867 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72870 similar to UniRef100_A7PIB9 Cluster: Chromosome... 1677 0.0
gnl|LJGI|TC76965 homologue to UniRef100_A7PIB9 Cluster: Chromoso... 672 0.0
gnl|LJGI|AV423594 similar to UniRef100_Q9N4G4 Cluster: Mediator ... 111 7e-24
>gnl|LJGI|TC72870 similar to UniRef100_A7PIB9 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1316
Score = 1677 bits (846), Expect = 0.0
Identities = 860/867 (99%)
Strand = Plus / Plus
Query: 1 atggcggcaagcgatcgcacagtgttgcaattctcttcatcttcttcctcctctcagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atggcggcaagcgatcgcacagtgttgcaattctcttcatcttcttcctcctctcagagc 155
Query: 61 ttgtccgctagggttcaccctctcgttatcttcaacatctgtgactgcttcgttcgacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttgtccgctagggttcaccctctcgttatcttcaacatctgtgactgcttcgttcgacgc 215
Query: 121 cctgaccaagctgagcgcgtcatcggaaccctacttggttccatcctccccgatggaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cctgaccaagctgagcgcgtcatcggaaccctacttggttccatcctccccgatggaacc 275
Query: 181 gtcgatatccgcaattcctacgccgttcctcacaacgagtctattgaccaggtagctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtcgatatccgcaattcctacgccgttcctcacaacgagtctattgaccaggtagctttg 335
Query: 241 gatatagagtaccaacataatatgctagtagcccaccagaaagtgaatccaaaggaagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gatatagagtaccaacataatatgctagtagcccaccagaaagtgaatccaaaggaagtc 395
Query: 301 atagttggatggtattcaactggccttggagtaaccggtcatagtgtattaatccatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atagttggatggtattcaactggccttggagtaaccggtcatagtgtattaatccatgaa 455
Query: 361 nnnnnnnctcgagaagttaccaatcccatacatttgactgttgacactgaatttgctaat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tttttttctcgagaagttaccaatcccatacatttgactgttgacactgaatttgctaat 515
Query: 421 ggagtgggtaccataaaagcatatgtgtcaaacaatttatcccttggagacaggcaaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggagtgggtaccataaaagcatatgtgtcaaacaatttatcccttggagacaggcaaatt 575
Query: 481 gctgcacagtttcaagaaattccattagatcttcgtatggttgaagctgagcgaattgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gctgcacagtttcaagaaattccattagatcttcgtatggttgaagctgagcgaattgga 635
Query: 541 tttgacaccctgaaggcaaccacagttgaaaaaattccctctgatttagaaggcatggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tttgacaccctgaaggcaaccacagttgaaaaaattccctctgatttagaaggcatggaa 695
Query: 601 gcatcaatggagcatctactagccttgattgatgacatatacaaatatgttgacgatgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gcatcaatggagcatctactagccttgattgatgacatatacaaatatgttgacgatgtt 755
Query: 661 gtggaagggcgtattgcacctgacaacaacattggaaaatttatatcagatgctgtaggc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gtggaagggcgtattgcacctgacaacaacattggaaaatttatatcagatgctgtaggc 815
Query: 721 tcccttcccaaatcgcccccagctgtttttgacaagcttgtgaatgacagcttgcaggat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 tcccttcccaaatcgcccccagctgtttttgacaagcttgtgaatgacagcttgcaggat 875
Query: 781 cacttgctctctctatatttatctagcatcacaagaacacagcttagcttggctgaaaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 cacttgctctctctatatttatctagcatcacaagaacacagcttagcttggctgaaaaa 935
Query: 841 ttgaacacagctgctcaaattctgtga 867
|||||||||||||||||||||||||||
Sbjct: 936 ttgaacacagctgctcaaattctgtga 962
>gnl|LJGI|TC76965 homologue to UniRef100_A7PIB9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (34%)
Length = 473
Score = 672 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Plus
Query: 1 atggcggcaagcgatcgcacagtgttgcaattctcttcatcttcttcctcctctcagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atggcggcaagcgatcgcacagtgttgcaattctcttcatcttcttcctcctctcagagc 194
Query: 61 ttgtccgctagggttcaccctctcgttatcttcaacatctgtgactgcttcgttcgacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttgtccgctagggttcaccctctcgttatcttcaacatctgtgactgcttcgttcgacgc 254
Query: 121 cctgaccaagctgagcgcgtcatcggaaccctacttggttccatcctccccgatggaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cctgaccaagctgagcgcgtcatcggaaccctacttggttccatcctccccgatggaacc 314
Query: 181 gtcgatatccgcaattcctacgccgttcctcacaacgagtctattgaccaggtagctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtcgatatccgcaattcctacgccgttcctcacaacgagtctattgaccaggtagctttg 374
Query: 241 gatatagagtaccaacataatatgctagtagcccaccagaaagtgaatccaaaggaagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gatatagagtaccaacataatatgctagtagcccaccagaaagtgaatccaaaggaagtc 434
Query: 301 atagttggatggtattcaactggccttggagtaaccggt 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atagttggatggtattcaactggccttggagtaaccggt 473
>gnl|LJGI|AV423594 similar to UniRef100_Q9N4G4 Cluster: Mediator of RNA polymerase II
transcription subunit 1.1; n=1; Caenorhabditis
elegans|Rep:, partial (1%)
Length = 225
Score = 111 bits (56), Expect = 7e-24
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 1 atggcggcaagcgatcgcacagtgttgcaattctcttcatcttcttcctcctctca 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atggcggcaagcgatcgcacagtgttgcaattctcttcatcttcttcctcctctca 101