Miyakogusa Predicted Gene
- Lj2g3v2688020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2688020.1 Non Chatacterized Hit- tr|F6HK57|F6HK57_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,80,2e-18,ubiquitin,Ubiquitin; Ubiquitin-like,NULL; no
description,NULL,CUFF.39203.1
(309 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80873 similar to UniRef100_A7QCJ8 Cluster: Chromosome... 589 e-168
gnl|LJGI|TC58423 similar to UniRef100_A7QCJ8 Cluster: Chromosome... 222 1e-57
gnl|LJGI|TC58018 similar to UniRef100_A7QCJ8 Cluster: Chromosome... 222 1e-57
gnl|LJGI|DC593375 UniRef100_A3UCX2 Cluster: Membrane-associated ... 119 1e-26
gnl|LJGI|TC82682 homologue to UniRef100_Q6W2J3 Cluster: VDAC1.3;... 78 4e-14
gnl|LJGI|BW599105 60 8e-09
gnl|LJGI|BP052292 weakly similar to UniRef100_Q1IP89 Cluster: Se... 50 8e-06
gnl|LJGI|AV780052 50 8e-06
gnl|LJGI|AV406728 50 8e-06
gnl|LJGI|TC73023 homologue to UniRef100_Q96449 Cluster: Meiotic ... 50 8e-06
>gnl|LJGI|TC80873 similar to UniRef100_A7QCJ8 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 1115
Score = 589 bits (297), Expect = e-168
Identities = 303/305 (99%)
Strand = Plus / Plus
Query: 1 atggcaatcgaccttcaatggtatctctcatggccacttccaattcatgagtccttcgat 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atggcaatcgaccttcaatcgtatctctcatggccacttccaattcatgagtccttcgat 516
Query: 61 cgcatctctcatggccccttccaatcgcatcttgaagcctcaatccatctcttccagtct 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 517 cgcatctctcatggccccttccaatcgcattttgaagcctcaatccatctcttccagtct 576
Query: 121 cgactcagagtcagagagacatcggaggaggagatgccactcaaggtcaaatggagcggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 cgactcagagtcagagagacatcggaggaggagatgccactcaaggtcaaatggagcggc 636
Query: 181 aaggattacacggtgcgagtctgcggcgacgacaccattgtcgaactcaagcgtcgaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aaggattacacggtgcgagtctgcggcgacgacaccattgtcgaactcaagcgtcgaatc 696
Query: 241 tgcgagttaaccaacgttttacccattcgccagaagttcttataccctaaactcggttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tgcgagttaaccaacgttttacccattcgccagaagttcttataccctaaactcggttcc 756
Query: 301 aagct 305
|||||
Sbjct: 757 aagct 761
>gnl|LJGI|TC58423 similar to UniRef100_A7QCJ8 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 1561
Score = 222 bits (112), Expect = 1e-57
Identities = 148/160 (92%)
Strand = Plus / Plus
Query: 140 catcggaggaggagatgccactcaaggtcaaatggagcggcaaggattacacggtgcgag 199
||||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||
Sbjct: 128 catcggaggaggagatgacactcaaggtcaaatgggccggcaaggattacaccgtccgag 187
Query: 200 tctgcggcgacgacaccattgtcgaactcaagcgtcgaatctgcgagttaaccaacgttt 259
||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 188 tctgcggcgacgacaccgtcggcgaactcaagcgtcgaatctgcgagctaaccaacgttt 247
Query: 260 tacccattcgccagaagttcttataccctaaactcggttc 299
||||||||||||||||| || | |||||||||||||||||
Sbjct: 248 tacccattcgccagaagctcctgtaccctaaactcggttc 287
>gnl|LJGI|TC58018 similar to UniRef100_A7QCJ8 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 828
Score = 222 bits (112), Expect = 1e-57
Identities = 148/160 (92%)
Strand = Plus / Plus
Query: 140 catcggaggaggagatgccactcaaggtcaaatggagcggcaaggattacacggtgcgag 199
||||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||
Sbjct: 153 catcggaggaggagatgacactcaaggtcaaatgggccggcaaggattacaccgtccgag 212
Query: 200 tctgcggcgacgacaccattgtcgaactcaagcgtcgaatctgcgagttaaccaacgttt 259
||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 213 tctgcggcgacgacaccgtcggcgaactcaagcgtcgaatctgcgagctaaccaacgttt 272
Query: 260 tacccattcgccagaagttcttataccctaaactcggttc 299
||||||||||||||||| || | |||||||||||||||||
Sbjct: 273 tacccattcgccagaagctcctgtaccctaaactcggttc 312
>gnl|LJGI|DC593375 UniRef100_A3UCX2 Cluster: Membrane-associated protein; n=1;
Oceanicaulis alexandrii HTCC2633|Rep:
Membrane-associated protein - Oceanicaulis alexandrii
HTCC2633, partial (10%)
Length = 587
Score = 119 bits (60), Expect = 1e-26
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 8 tcgaccttcaatggtatctctcatggccacttccaattcatgagtccttcgatcgcatct 67
|||||||||||| |||||||||| | || ||||||||||| | ||||| |||||||||
Sbjct: 239 tcgaccttcaatcgtatctctcacgaccccttccaattcactcgaccttcaatcgcatct 298
Query: 68 ctcatggccccttccaatcgcatcttgaagcctcaa 103
||||||||||||||||||||||||||||||||||||
Sbjct: 299 ctcatggccccttccaatcgcatcttgaagcctcaa 334
>gnl|LJGI|TC82682 homologue to UniRef100_Q6W2J3 Cluster: VDAC1.3; n=1; Lotus
japonicus|Rep: VDAC1.3 - Lotus japonicus, partial (13%)
Length = 750
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 53 ccttcgatcgcatctctcatggccccttccaatcgcatcttgaagcctcaa 103
||||| |||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 52 ccttctatcgcatctctcatggacccttccaatcgcaccttgaagcctcaa 102
>gnl|LJGI|BW599105
Length = 484
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 atggcaatcgaccttcaatggtatctctcatggccact 38
||||||||| ||||||||| ||||||||||||||||||
Sbjct: 447 atggcaatcaaccttcaatcgtatctctcatggccact 484
>gnl|LJGI|BP052292 weakly similar to UniRef100_Q1IP89 Cluster: Serine/threonine
protein kinase with TPR repeats; n=1; Acidobacteria
bacterium Ellin345|, partial (2%)
Length = 478
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 53 ccttcgatcgcatctctcatggccccttccaat 85
||||| |||| ||||||||||||||||||||||
Sbjct: 99 ccttcaatcgaatctctcatggccccttccaat 131
>gnl|LJGI|AV780052
Length = 584
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 53 ccttcgatcgcatctctcatggccccttccaat 85
||||| |||| ||||||||||||||||||||||
Sbjct: 52 ccttcaatcgaatctctcatggccccttccaat 84
>gnl|LJGI|AV406728
Length = 428
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 53 ccttcgatcgcatctctcatggccccttccaat 85
||||| |||| ||||||||||||||||||||||
Sbjct: 80 ccttcaatcgaatctctcatggccccttccaat 112
>gnl|LJGI|TC73023 homologue to UniRef100_Q96449 Cluster: Meiotic recombination
protein DMC1 homolog; n=1; Glycine max|Rep: Meiotic
recombination protein DMC1 homolog - Glycine max
(Soybean), partial (22%)
Length = 1105
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 53 ccttcgatcgcatctctcatggccccttccaat 85
||||| |||| ||||||||||||||||||||||
Sbjct: 130 ccttcaatcgaatctctcatggccccttccaat 162