Miyakogusa Predicted Gene

Lj2g3v2673920.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2673920.1 tr|F6LPU8|F6LPU8_MEDTR Rop guanine nucleotide
exchange factor OS=Medicago truncatula
GN=MTR_3g069590,77.61,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PRONE,Plant specific Rop nucleotide exchanger,
PRON,CUFF.39192.1
         (1773 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79297 similar to UniRef100_A7PIJ5 Cluster: Chromosome...   323   2e-87
gnl|LJGI|FS327751 weakly similar to UniRef100_A7PIJ5 Cluster: Ch...   125   1e-27
gnl|LJGI|GO012525 similar to UniRef100_A7PNW1 Cluster: Chromosom...    94   4e-18

>gnl|LJGI|TC79297 similar to UniRef100_A7PIJ5 Cluster: Chromosome chr13 scaffold_17,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_17, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (26%)
          Length = 1034

 Score =  323 bits (163), Expect = 2e-87
 Identities = 346/407 (85%)
 Strand = Plus / Plus

                                                                        
Query: 994  tgcctgctcgattgcttggacatctcatctgaacatgttgcgctagagatcgcgaaccgt 1053
            |||||||| |||||||| ||| |||| ||||| |||||||| |||||||| || ||||||
Sbjct: 26   tgcctgcttgattgcttagacctctcctctgagcatgttgcactagagattgctaaccgt 85

                                                                        
Query: 1054 gtggaagcagcaatttatgtatggcgtagaagagctcactccaggtcctctcctagtccc 1113
            ||  ||||  ||||| ||||||||||| |||||| |||||| ||  || | || | ||| 
Sbjct: 86   gtttaagcttcaattcatgtatggcgtcgaagaggtcactctagacccccaccgaatcct 145

                                                                        
Query: 1114 aaccgtacaagcacaaggtcatcctgggagattgtcaaggacttcatggttgatggagat 1173
            | |||| |||  |||| |||||| ||||| ||||||||||||||||||| ||||||||| 
Sbjct: 146  agccgttcaactacaaagtcatcttgggaaattgtcaaggacttcatggctgatggagac 205

                                                                        
Query: 1174 aagagagaactgctagcagatagagctgaaaacattctcctttccttgaagcagcggttc 1233
            ||||||||  |||| ||||| ||||||||||| ||||| ||||| ||||||||||| |||
Sbjct: 206  aagagagagttgctggcagaaagagctgaaaatattctactttcattgaagcagcgattc 265

                                                                        
Query: 1234 ccaggcttatctcaaactacccttgataccagcaaaatccagtgcaacaaggatgttgga 1293
            || || ||| ||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 266  ccgggattaactcaaactaccttggataccagcaaaatccagtgcaacaaggatgttgga 325

                                                                        
Query: 1294 aaatccattttggagagctactcaagagttttggagagcatggcttttaacatcatagcc 1353
            ||| ||||  | ||| |||| ||||||||| ||||||||||||| ||||||||  |||| 
Sbjct: 326  aaagccatcctagagggctattcaagagttctggagagcatggcatttaacattgtagct 385

                                                           
Query: 1354 cgcattgatgatttgctctatgtggatgacctgaccaaacattcaga 1400
            || || ||||||||||| |||||||||||| |||| |||||||||||
Sbjct: 386  cgtatagatgatttgctatatgtggatgacttgacaaaacattcaga 432



 Score = 75.8 bits (38), Expect = 8e-13
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1594 aaacctcatcgtcgcggctttggggtgagaagagtattgtcaaattatcttggaggagag 1653
            |||||||| ||||| |||||||| ||| ||||||  ||||||||||||||||||||||||
Sbjct: 614  aaacctcaacgtcgtggctttggcgtgcgaagagcgttgtcaaattatcttggaggagag 673

              
Query: 1654 ac 1655
            ||
Sbjct: 674  ac 675


>gnl|LJGI|FS327751 weakly similar to UniRef100_A7PIJ5 Cluster: Chromosome chr13
           scaffold_17, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (12%)
          Length = 646

 Score =  125 bits (63), Expect = 1e-27
 Identities = 78/83 (93%)
 Strand = Plus / Plus

                                                                       
Query: 298 atgatgaaggaaaggtttgcaaaattgttgcttggggaagatatgtcaggttctggaaaa 357
           ||||||||||||||||||||||||||| ||||||| ||||||||||||||  ||||||||
Sbjct: 562 atgatgaaggaaaggtttgcaaaattgctgcttggtgaagatatgtcaggacctggaaaa 621

                                  
Query: 358 ggggtttgcactgctttggccat 380
           || ||||||||||||||||||||
Sbjct: 622 ggagtttgcactgctttggccat 644


>gnl|LJGI|GO012525 similar to UniRef100_A7PNW1 Cluster: Chromosome chr8 scaffold_23,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_23, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (27%)
          Length = 620

 Score = 93.7 bits (47), Expect = 4e-18
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1264 agcaaaatccagtgcaacaaggatgttggaaaatccattttggagagctactcaagagtt 1323
            ||||||||||| |||||||||||||| || ||||||||| | ||||| ||||||||||| 
Sbjct: 226  agcaaaatccaatgcaacaaggatgtagggaaatccattctagagagttactcaagagta 285

                                                                       
Query: 1324 ttggagagcatggcttttaacatcatagcccgcattgatgatttgctctatgtggatga 1382
             |||||||  |||||| ||| ||  | || |||||||||||| |||||||||| |||||
Sbjct: 286  ctggagagtttggcttctaatattgttgcgcgcattgatgatgtgctctatgtagatga 344