Miyakogusa Predicted Gene

Lj2g3v2661480.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2661480.1 tr|G7K212|G7K212_MEDTR LIM and UIM
domain-containing OS=Medicago truncatula GN=MTR_5g081160 PE=4
SV=,86.14,0,Zinc-binding domain present in Lin-11, Isl-1,Zinc finger,
LIM-type; LIM_DOMAIN_2,Zinc finger, LIM-ty,CUFF.39175.1
         (1509 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS343179 weakly similar to UniRef100_A7PIM8 Cluster: Ch...   188   7e-47

>gnl|LJGI|FS343179 weakly similar to UniRef100_A7PIM8 Cluster: Chromosome chr13
           scaffold_17, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (28%)
          Length = 750

 Score =  188 bits (95), Expect = 7e-47
 Identities = 191/223 (85%)
 Strand = Plus / Plus

                                                                       
Query: 469 tttcatccagactgcttccgctgtcacgcttgtcgttaccccattaccgagcgtgagttt 528
           |||||| |||| ||||||   |||||| |||||| | |||||||||  ||||||||||| 
Sbjct: 528 tttcattcagattgcttcaagtgtcactcttgtcatcaccccattaaagagcgtgagttc 587

                                                                       
Query: 529 tcactgtcagggaagcatccatatcacaagtcctgttttcaagagctgacccacccaaaa 588
           ||  |||||||||||||||||||||||||||||||||||  | |  |||| ||||| |||
Sbjct: 588 tctttgtcagggaagcatccatatcacaagtcctgttttataaatttgacacaccctaaa 647

                                                                       
Query: 589 tgcgaagtttgcttccaatttattcctataaatgctgctggtttgattgagtataggtgc 648
           || |||||||||   |||  ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 648 tgtgaagtttgccatcaacatatacctataaatgctgctggtttgattgagtataggtgc 707

                                                      
Query: 649 cacccattttggtcccaaaagtattgtccatctcatgaatatg 691
           ||||| | ||||  ||||||||||||||| |||||||||||||
Sbjct: 708 cacccctattggaaccaaaagtattgtccgtctcatgaatatg 750



 Score = 69.9 bits (35), Expect = 4e-11
 Identities = 160/201 (79%), Gaps = 3/201 (1%)
 Strand = Plus / Plus

                                                                       
Query: 62  actcagagagaaagtctggtttcatgaaatggcttagtaagcttttcaaaggtgggtcca 121
           ||||||||||||||||||||||  |||||| | || | ||| ||||||||  | ||||||
Sbjct: 110 actcagagagaaagtctggttttgtgaaattgtttggcaagattttcaaaatttggtcca 169

                                                                       
Query: 122 atagagcaaggg---gtggtcgtcgtctgcatgagcctgccgaggaaaacatagtttggc 178
            ||||| || ||   |||||| || ||| ||  ||||||| ||||||||||| |||||||
Sbjct: 170 gtagaggaaagggtcgtggtcatcatcttcagcagcctgcggaggaaaacatggtttggc 229

                                                                       
Query: 179 gtgctccatctagagccttggatgatcgtgctagagctccgaaggagaacgaggatctag 238
           | | ||||  |||| | | || | | ||||||||| ||| ||||||| | |||||||| |
Sbjct: 230 gagttccaattagatcttcgggtaaccgtgctagatctcagaaggaggaagaggatctgg 289

                                
Query: 239 gccatgcaatggcactttctt 259
            || |||||| ||||||||||
Sbjct: 290 accgtgcaatagcactttctt 310