Miyakogusa Predicted Gene

Lj2g3v2658300.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2658300.1 tr|D7KDK7|D7KDK7_ARALL Mitochondrial glycoprotein
family protein OS=Arabidopsis lyrata subsp. lyrata,33.66,7e-19,no
description,Mitochondrial glycoprotein; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; MAM33,Mi,CUFF.39163.1
         (774 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69142 similar to UniRef100_A7PIN3 Cluster: Chromosome...  1534   0.0  
gnl|LJGI|AV770446                                                     123   2e-27

>gnl|LJGI|TC69142 similar to UniRef100_A7PIN3 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (43%)
          Length = 1204

 Score = 1534 bits (774), Expect = 0.0
 Identities = 774/774 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgttcaactcgattcttcgcaagtcgagtcctttattgaggtcttttgctgctgcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  atggcgttcaactcgattcttcgcaagtcgagtcctttattgaggtcttttgctgctgcg 129

                                                                       
Query: 61  ggccaattgatcaagaaaacccaaccgggtcatcgcgccgccctgttcgccgccgtcaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ggccaattgatcaagaaaacccaaccgggtcatcgcgccgccctgttcgccgccgtcaac 189

                                                                       
Query: 121 cagctgcaccggcaccaggattccgtggttccgagatttcacttttcttctgtggctgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cagctgcaccggcaccaggattccgtggttccgagatttcacttttcttctgtggctgtc 249

                                                                       
Query: 181 aagaacaaacccacctccgatgagacccttctccgagtcatcgaatccgaaatcacctgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aagaacaaacccacctccgatgagacccttctccgagtcatcgaatccgaaatcacctgc 309

                                                                       
Query: 241 gctgaggaaaccgacgatcacagcgctgaggaggatcttccgaaaaattttccttttaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gctgaggaaaccgacgatcacagcgctgaggaggatcttccgaaaaattttccttttaag 369

                                                                       
Query: 301 atagttgataatccgggaaaccagaccataacactggaaaggacttaccaaggtgaagag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atagttgataatccgggaaaccagaccataacactggaaaggacttaccaaggtgaagag 429

                                                                       
Query: 361 attaaggttcaggttgacatgcctgatcttgtcacaggggaagaaaatggtgttgatggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 attaaggttcaggttgacatgcctgatcttgtcacaggggaagaaaatggtgttgatggt 489

                                                                       
Query: 421 ggcggtgatgatgagagtgagagagcatctcagtcaagccttccactttcagtgagtgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggcggtgatgatgagagtgagagagcatctcagtcaagccttccactttcagtgagtgtt 549

                                                                       
Query: 481 tccaagaagggtggacccttcttggagtttagctgtatggcttactctgatgagattgtt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tccaagaagggtggacccttcttggagtttagctgtatggcttactctgatgagattgtt 609

                                                                       
Query: 541 attgacagcttgtctgttaagaatcctgagctttctgaggatcaaattgcttatgaggga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 attgacagcttgtctgttaagaatcctgagctttctgaggatcaaattgcttatgaggga 669

                                                                       
Query: 601 ccggattttcaggatctggatgagagtttgcagaagtctttccacaagtatttagaaatc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ccggattttcaggatctggatgagagtttgcagaagtctttccacaagtatttagaaatc 729

                                                                       
Query: 661 agaggaatcaaacctagcacaacaaatttcttgcatgagtacatgatcaacaaggacagt 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 agaggaatcaaacctagcacaacaaatttcttgcatgagtacatgatcaacaaggacagt 789

                                                                 
Query: 721 aaagaatacttggtgtggttgaaaaaggtcaagagcttcattcaagcatgagct 774
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aaagaatacttggtgtggttgaaaaaggtcaagagcttcattcaagcatgagct 843


>gnl|LJGI|AV770446 
          Length = 308

 Score =  123 bits (62), Expect = 2e-27
 Identities = 118/130 (90%), Gaps = 5/130 (3%)
 Strand = Plus / Plus

                                                                       
Query: 8   tcaactcgattcttcgcaagtcgagtccttt-attgaggtcttttgctg-ctgcgggcca 65
           |||||||||||||||||||||||||| |||| || |||||||   |||| ||||||||||
Sbjct: 54  tcaactcgattcttcgcaagtcgagttctttgatcgaggtctggggctggctgcgggcca 113

                                                                       
Query: 66  attgatcaagaaaacccaaccgggtcatcgcgccgccc-tgttcgccgccg-tcaaccag 123
           || |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 114 atagatcaagaaaacccaaccgggtcatcgcgccgcccgggttcgccgccgatcaaccag 173

                     
Query: 124 c-tgcaccgg 132
           | ||||||||
Sbjct: 174 cgtgcaccgg 183