Miyakogusa Predicted Gene
- Lj2g3v2598840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2598840.1 CUFF.39149.1
(285 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 565 e-161
gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome... 56 1e-07
gnl|LJGI|TC61574 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 56 1e-07
>gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1275
Score = 565 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 atgaagcacatggaaggtgacggggactctgaagttctgaatatgatggatgccttacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atgaagcacatggaaggtgacggggactctgaagttctgaatatgatggatgccttacat 535
Query: 61 gaagatttaagagaaaaggaactgtcactccgagagttggatgcattgaaccaaacactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gaagatttaagagaaaaggaactgtcactccgagagttggatgcattgaaccaaacactg 595
Query: 121 atcattaaagagcgtaaaagcaatgatgagctacaggaagctcgaagagaattgataaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atcattaaagagcgtaaaagcaatgatgagctacaggaagctcgaagagaattgataaag 655
Query: 181 gtcattaaagagatacctactcgtgacaatattggtgtcaagagaatgggtgaacttgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gtcattaaagagatacctactcgtgacaatattggtgtcaagagaatgggtgaacttgac 715
Query: 241 actagaccgttcgtagaagctatgaagatgaaatataatgaggca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 actagaccgttcgtagaagctatgaagatgaaatataatgaggca 760
>gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1863
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 220 aagagaatgggtgaacttgacactagaccgttcgtagaagctatgaagatgaaatataat 279
||||||||||| ||||| |||||| |||||||| | ||||| ||||||| | |||||||
Sbjct: 1703 aagagaatgggggaactggacactggaccgttccttgaagccatgaagaaaagatataat 1762
Query: 280 gagg 283
||||
Sbjct: 1763 gagg 1766
>gnl|LJGI|TC61574 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 941
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 220 aagagaatgggtgaacttgacactagaccgttcgtagaagctatgaagatgaaatataat 279
||||||||||| ||||| |||||| |||||||| | ||||| ||||||| | |||||||
Sbjct: 259 aagagaatgggggaactggacactggaccgttccttgaagccatgaagaaaagatataat 318
Query: 280 gagg 283
||||
Sbjct: 319 gagg 322