Miyakogusa Predicted Gene
- Lj2g3v2587680.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2587680.2 tr|G7KBR5|G7KBR5_MEDTR AP-3 complex subunit
beta-2 OS=Medicago truncatula GN=MTR_5g079920 PE=4
SV=1,84.4,0,ADAPTER-RELATED PROTEIN COMPLEX 3, BETA SUBUNIT,AP-3
complex subunit beta; ADAPTER-RELATED PROTEIN C,CUFF.39140.2
(3387 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82580 similar to UniRef100_A7PIU1 Cluster: Chromosome... 1334 0.0
gnl|LJGI|TC70667 similar to UniRef100_A7PIU1 Cluster: Chromosome... 537 e-151
gnl|LJGI|AV425807 weakly similar to UniRef100_A7PIU1 Cluster: Ch... 442 e-123
>gnl|LJGI|TC82580 similar to UniRef100_A7PIU1 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 702
Score = 1334 bits (673), Expect = 0.0
Identities = 673/673 (100%)
Strand = Plus / Plus
Query: 663 tgagattcttcctgatgtggaagaatggggtcaaataatgctaattgggatccttctgcg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagattcttcctgatgtggaagaatggggtcaaataatgctaattgggatccttctgcg 60
Query: 723 gtttgtgatagcgaggcatgggcttgtcaaagaatccatcatgttctcattgtacaataa 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttgtgatagcgaggcatgggcttgtcaaagaatccatcatgttctcattgtacaataa 120
Query: 783 agatggtgacacgttagaggaagatgaaagccaagttagtttaagagaagatgatggtta 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatggtgacacgttagaggaagatgaaagccaagttagtttaagagaagatgatggtta 180
Query: 843 tgcctctgagcagtctgtatcggaatttgctaatatgatcttccagtgttacattgaagg 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcctctgagcagtctgtatcggaatttgctaatatgatcttccagtgttacattgaagg 240
Query: 903 gccagatgagtacttatcacgatcaagttctacaagtagggttgctcctaaattagatgt 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccagatgagtacttatcacgatcaagttctacaagtagggttgctcctaaattagatgt 300
Query: 963 atcacaatatacatcttgctctgatgaggttgtgaagatcctgctgcagtgtacatcacc 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcacaatatacatcttgctctgatgaggttgtgaagatcctgctgcagtgtacatcacc 360
Query: 1023 attattttggtctaataacagtgcagttgtactatcagctgctggagtacactggataat 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attattttggtctaataacagtgcagttgtactatcagctgctggagtacactggataat 420
Query: 1083 ggcttctaaagagaatgttaaaagaattgttaaaccactcttgtttgtccagcgatcatc 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcttctaaagagaatgttaaaagaattgttaaaccactcttgtttgtccagcgatcatc 480
Query: 1143 atacgcctcaagatacgtggtattgtgcaatatccaagtgtttgctaaagctatgccatc 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atacgcctcaagatacgtggtattgtgcaatatccaagtgtttgctaaagctatgccatc 540
Query: 1203 tctctttgctccacactatcaagactttttcatatgttcttcagattcctatcagataaa 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctctttgctccacactatcaagactttttcatatgttcttcagattcctatcagataaa 600
Query: 1263 agcgctgaagctggagatactttcttctattgctacggattcatccgttccattaattct 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agcgctgaagctggagatactttcttctattgctacggattcatccgttccattaattct 660
Query: 1323 taaagagtttcag 1335
|||||||||||||
Sbjct: 661 taaagagtttcag 673
>gnl|LJGI|TC70667 similar to UniRef100_A7PIU1 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 663
Score = 537 bits (271), Expect = e-151
Identities = 307/319 (96%)
Strand = Plus / Plus
Query: 3069 ctctttaaccgaggacaaatttcttgtgatctgcgaaaccttagcgataaagatgctgag 3128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctctttaaccgaggacaaatttcttgtgatctgcgaaaccttagcgataaagatgctgag 60
Query: 3129 caatgcaaatctctctattgtatctgtggatatgccagttgcttccaatcttgatgatgc 3188
| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 61 ccatgccaatctctctattgtatctgtggatatgcccgttgcttcccatcttgatgatgc 120
Query: 3189 atctggtttgtgcttgcgtttctgcagtgagatcctgagcaattccatgccatgcttaat 3248
||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 121 atctggtttgtgcttgcgtttctgccgtgagatcctgagccattccctgccatgcttaat 180
Query: 3249 tacagttactgttgaaggtaaatgctccgacccattgactgcttctgtaaaggtcaactg 3308
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 181 taccgttactgttgaaggtaaatgctccgaccccttgactgcttctgtaaaggtccactg 240
Query: 3309 tgaagacactgtatttggcttaaatttcttaaatagggttgtcaatttcttggttgagcc 3368
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 tgaagaccctgtatttggcttaaatttcttaaatagggttgtccatttcttggttgagcc 300
Query: 3369 atatgttgccctctcttaa 3387
|||||||||||||||||||
Sbjct: 301 atatgttgccctctcttaa 319
>gnl|LJGI|AV425807 weakly similar to UniRef100_A7PIU1 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 368
Score = 442 bits (223), Expect = e-123
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 2754 caccttgaaatttaacattgataaaccagcagtggtttccatggaagacatcctttctct 2813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 caccttgaaatttaacattgataaaccagcagtggtttccatggaagacatcctttctct 205
Query: 2814 ggagcctggtcaaatagctaaacggactctacttgcgcgcttccatcaccatctcttgcc 2873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggagcctggtcaaatagctaaacggactctacttgcgcgcttccatcaccatctcttgcc 265
Query: 2874 tctcaaactgtctttattttgcaatgacaatagattccctgttaagctaaggcctgatat 2933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tctcaaactgtctttattttgcaatgacaatagattccctgttaagctaaggcctgatat 325
Query: 2934 tggatactttgtaaaaccgcttccaattagtaatgaagctttc 2976
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tggatactttgtaaaaccgcttccaattagtaatgaagctttc 368