Miyakogusa Predicted Gene
- Lj2g3v2586520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2586520.1 Non Chatacterized Hit- tr|B4FND7|B4FND7_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,51.14,3e-19,seg,NULL,CUFF.39134.1
(540 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76982 1005 0.0
gnl|LJGI|TC71972 similar to UniRef100_Q9FYA9 Cluster: SC35-like ... 640 0.0
gnl|LJGI|TC62011 587 e-167
>gnl|LJGI|TC76982
Length = 1148
Score = 1005 bits (507), Expect = 0.0
Identities = 530/539 (98%), Gaps = 9/539 (1%)
Strand = Plus / Plus
Query: 1 atgaaccgtcagatttttgctggaagggaaataactgtagttgtggcttcagagacaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atgaaccgtcagatttttgctggaagggaaataactgtagttgtggcttcagagacaaga 488
Query: 61 aaaagacctgaggagatgcgccataggaccaggtccagtagaccagacaactatggaggg 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 489 aaaagacctgaggagatgcgccataggaccag---------accagacaactatggaggg 539
Query: 121 cgtaggtcttctcatcatgggcgttcccgatctcgctccattacccgatcacgctcacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cgtaggtcttctcatcatgggcgttcccgatctcgctccattacccgatcacgctcacca 599
Query: 181 ccttatcactctggttctagaagtagatatcgctcaaggtccttttctcctgctccaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ccttatcactctggttctagaagtagatatcgctcaaggtccttttctcctgctccaaga 659
Query: 241 cggcgtgatgattactctgtttcccctagaaggcaagcagagcaccctagatcacctaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cggcgtgatgattactctgtttcccctagaaggcaagcagagcaccctagatcacctaga 719
Query: 301 agccctagatcacctagaagcccttctagggagcgagatggtgatcataagcgcaggtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agccctagatcacctagaagcccttctagggagcgagatggtgatcataagcgcaggtca 779
Query: 361 tactctccaccttatgacaatggtgctgatcagaaccaaggcaatggctatactgagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tactctccaccttatgacaatggtgctgatcagaaccaaggcaatggctatactgagaaa 839
Query: 421 tctgtatacaagtctgaggctgatcgaggccagttgaagtcatcccgcagagaatcaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tctgtatacaagtctgaggctgatcgaggccagttgaagtcatcccgcagagaatcaaga 899
Query: 481 tcaccacttcgatctagatcaagatctgctgatttgtcacccagacatggaagatgagg 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 tcaccacttcgatctagatcaagatctgctgatttgtcacccagacatggaagatgagg 958
>gnl|LJGI|TC71972 similar to UniRef100_Q9FYA9 Cluster: SC35-like splicing factor SCL30,
30 kD; n=1; Arabidopsis thaliana|Rep: SC35-like splicing
factor SCL30, 30 kD - Arabidopsis thaliana (Mouse-ear
cress), partial (67%)
Length = 1360
Score = 640 bits (323), Expect = 0.0
Identities = 323/323 (100%)
Strand = Plus / Plus
Query: 217 aggtccttttctcctgctccaagacggcgtgatgattactctgtttcccctagaaggcaa 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 aggtccttttctcctgctccaagacggcgtgatgattactctgtttcccctagaaggcaa 767
Query: 277 gcagagcaccctagatcacctagaagccctagatcacctagaagcccttctagggagcga 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gcagagcaccctagatcacctagaagccctagatcacctagaagcccttctagggagcga 827
Query: 337 gatggtgatcataagcgcaggtcatactctccaccttatgacaatggtgctgatcagaac 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 gatggtgatcataagcgcaggtcatactctccaccttatgacaatggtgctgatcagaac 887
Query: 397 caaggcaatggctatactgagaaatctgtatacaagtctgaggctgatcgaggccagttg 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 caaggcaatggctatactgagaaatctgtatacaagtctgaggctgatcgaggccagttg 947
Query: 457 aagtcatcccgcagagaatcaagatcaccacttcgatctagatcaagatctgctgatttg 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 aagtcatcccgcagagaatcaagatcaccacttcgatctagatcaagatctgctgatttg 1007
Query: 517 tcacccagacatggaagatgagg 539
|||||||||||||||||||||||
Sbjct: 1008 tcacccagacatggaagatgagg 1030
Score = 404 bits (204), Expect = e-112
Identities = 217/220 (98%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 1 atgaaccgtcagatttttgctggaagggaaataactgtagttgtggcttcagagacaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 atgaaccgtcagatttttgctggaagggaaataactgtagttgtggcttcagagacaaga 475
Query: 61 aaaagacctgaggagatgcgccataggaccaggtccagt-agaccagacaactatggagg 119
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
Sbjct: 476 aaaagacctgaggagatgcgccataggaccaggtccagttagaacagacaactatggaag 535
Query: 120 gcgtaggtcttctcatcatgggcgttcccgatctcgctccattacccgatcacgctcacc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gcgtaggtcttctcatcatgggcgttcccgatctcgctccattacccgatcacgctcacc 595
Query: 180 accttatcactctggttctagaagtagatatcgctcaagg 219
||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 accttatcactctggttctagaagtagatatcgctcaagg 635
>gnl|LJGI|TC62011
Length = 760
Score = 587 bits (296), Expect = e-167
Identities = 296/296 (100%)
Strand = Plus / Plus
Query: 1 atgaaccgtcagatttttgctggaagggaaataactgtagttgtggcttcagagacaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atgaaccgtcagatttttgctggaagggaaataactgtagttgtggcttcagagacaaga 524
Query: 61 aaaagacctgaggagatgcgccataggaccaggtccagtagaccagacaactatggaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aaaagacctgaggagatgcgccataggaccaggtccagtagaccagacaactatggaggg 584
Query: 121 cgtaggtcttctcatcatgggcgttcccgatctcgctccattacccgatcacgctcacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cgtaggtcttctcatcatgggcgttcccgatctcgctccattacccgatcacgctcacca 644
Query: 181 ccttatcactctggttctagaagtagatatcgctcaaggtccttttctcctgctccaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ccttatcactctggttctagaagtagatatcgctcaaggtccttttctcctgctccaaga 704
Query: 241 cggcgtgatgattactctgtttcccctagaaggcaagcagagcaccctagatcacc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 cggcgtgatgattactctgtttcccctagaaggcaagcagagcaccctagatcacc 760