Miyakogusa Predicted Gene
- Lj2g3v2585500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2585500.1 tr|G7KBR0|G7KBR0_MEDTR Ribosomal RNA large
subunit methyltransferase N OS=Medicago truncatula
GN=MTR,84.28,0,Radical_SAM,Radical SAM; Fer4_14,NULL; no
description,Radical SAM, alpha/beta horseshoe; Radical
SAM,CUFF.39122.1
(1224 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63339 similar to UniRef100_A7PIW5 Cluster: Chromosome... 1548 0.0
gnl|LJGI|TC62359 similar to UniRef100_A7PIW5 Cluster: Chromosome... 716 0.0
>gnl|LJGI|TC63339 similar to UniRef100_A7PIW5 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 843
Score = 1548 bits (781), Expect = 0.0
Identities = 781/781 (100%)
Strand = Plus / Plus
Query: 1 atgctggcgttgcttcagcactgctctgcgcctctcgcacgtgcgttccgtccgccacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgctggcgttgcttcagcactgctctgcgcctctcgcacgtgcgttccgtccgccacct 122
Query: 61 cgcacacgtgccatggccatcgccgccgcttcccctcgcaccatctcacagcctcaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cgcacacgtgccatggccatcgccgccgcttcccctcgcaccatctcacagcctcaggtt 182
Query: 121 ctccttggcttatctgagcaggaccttcgacagcttgcccttgacttgggtcagcaaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ctccttggcttatctgagcaggaccttcgacagcttgcccttgacttgggtcagcaaggt 242
Query: 181 ttcagggggaggcaactgtatcatcttatatacaagaggaagattagagaagttcaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttcagggggaggcaactgtatcatcttatatacaagaggaagattagagaagttcaggag 302
Query: 241 tttattcagttgcctcaggcatttaggaatgatctcgaggaagctggatggaaggtgggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tttattcagttgcctcaggcatttaggaatgatctcgaggaagctggatggaaggtgggg 362
Query: 301 cggtctcctattttcaagagtgtcactgcagctgatgggactgttaagttgttgttaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cggtctcctattttcaagagtgtcactgcagctgatgggactgttaagttgttgttaaag 422
Query: 361 ttggaggacaacaggttgattgaaactgttggtattccagttgatgatgataaaggttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttggaggacaacaggttgattgaaactgttggtattccagttgatgatgataaaggttca 482
Query: 421 ggtcgcctcacagcatgtgtctcatcacaggttggttgccctttgcgttgctctttttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggtcgcctcacagcatgtgtctcatcacaggttggttgccctttgcgttgctctttttgt 542
Query: 481 gccactgggaaagggggcttttcaaggaatcttcagaaacatgaaatcgttgagcaggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gccactgggaaagggggcttttcaaggaatcttcagaaacatgaaatcgttgagcaggtc 602
Query: 541 ttagcgattgaggaggtcttcaaacgcagggtgacaaatgtggtgtttatgggaatggga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttagcgattgaggaggtcttcaaacgcagggtgacaaatgtggtgtttatgggaatggga 662
Query: 601 gaaccaatgttaaacctgaaggcagtacttggagcacatcagtgcttaaataaggatgtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaaccaatgttaaacctgaaggcagtacttggagcacatcagtgcttaaataaggatgtg 722
Query: 661 caaattgggcagagaatgatgaccatctccactgtgggggttccaaatacaatgaagaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 caaattgggcagagaatgatgaccatctccactgtgggggttccaaatacaatgaagaag 782
Query: 721 ctggctactcacaaacttcaatcgactttagctgtgagcctacatgctcctaaccagaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 ctggctactcacaaacttcaatcgactttagctgtgagcctacatgctcctaaccagaaa 842
Query: 781 c 781
|
Sbjct: 843 c 843
>gnl|LJGI|TC62359 similar to UniRef100_A7PIW5 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 812
Score = 716 bits (361), Expect = 0.0
Identities = 361/361 (100%)
Strand = Plus / Plus
Query: 864 aaatagacgagtttcctttgaatatgcacttttagctggaatcaatgactcagtggatca 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatagacgagtttcctttgaatatgcacttttagctggaatcaatgactcagtggatca 60
Query: 924 tgcagtagaactagctaaactacttcgtgaatggggatctggttatcatgtcaacctgat 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcagtagaactagctaaactacttcgtgaatggggatctggttatcatgtcaacctgat 120
Query: 984 accttttaatccaatagaaggctctgagtataagcgtccttacaggaaagcagtgaaagc 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accttttaatccaatagaaggctctgagtataagcgtccttacaggaaagcagtgaaagc 180
Query: 1044 attttctgatgctttagagtcctctaaaattactgttagcgtacgtcaaaccagaggact 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attttctgatgctttagagtcctctaaaattactgttagcgtacgtcaaaccagaggact 240
Query: 1104 ggatgcaaatgcagcttgtggtcagctccggaacgagttccagaaagctcctatggccac 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggatgcaaatgcagcttgtggtcagctccggaacgagttccagaaagctcctatggccac 300
Query: 1164 tgactctgacaatctggaatcccagctaccaaatatggaacttgcagcaaccggatgacg 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgactctgacaatctggaatcccagctaccaaatatggaacttgcagcaaccggatgacg 360
Query: 1224 c 1224
|
Sbjct: 361 c 361