Miyakogusa Predicted Gene

Lj2g3v2574440.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2574440.1 Non Chatacterized Hit- tr|I1JHY7|I1JHY7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.08,0,AAR2,A1
cistron-splicing factor, AAR2; SUBFAMILY NOT NAMED,NULL; A1 CISTRON
SPLICING FACTOR AAR2-REL,CUFF.39117.1
         (1182 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72018 similar to UniRef100_Q9M4F5 Cluster: CePP prote...   835   0.0  
gnl|LJGI|BP028776                                                     111   1e-23

>gnl|LJGI|TC72018 similar to UniRef100_Q9M4F5 Cluster: CePP protein; n=1; Brassica
           napus var. napus|Rep: CePP protein - Brassica napus var.
           napus, partial (32%)
          Length = 485

 Score =  835 bits (421), Expect = 0.0
 Identities = 421/421 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattcttccacagcgttggagcttgtcaagcatggtgtctctcttctcttcctcgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  atggattcttccacagcgttggagcttgtcaagcatggtgtctctcttctcttcctcgat 124

                                                                       
Query: 61  gttcctcagtacaccctcattgccatcgatactcagatgttttctgtggggcctgctttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gttcctcagtacaccctcattgccatcgatactcagatgttttctgtggggcctgctttt 184

                                                                       
Query: 121 aagggtattaagatgattcctccaggcactcattttgtgtactatagttcatcaaccaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aagggtattaagatgattcctccaggcactcattttgtgtactatagttcatcaaccaga 244

                                                                       
Query: 181 gatggaaaggagttctcgccaattatcggattcttcattgatgctggtccttcagaggta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gatggaaaggagttctcgccaattatcggattcttcattgatgctggtccttcagaggta 304

                                                                       
Query: 241 attgttcgtaaatgggatcaacaggaggaaaggctggtcaaagtatctgaggatgatgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 attgttcgtaaatgggatcaacaggaggaaaggctggtcaaagtatctgaggatgatgaa 364

                                                                       
Query: 301 gaaagatatactcaagctgttagaaatttagaattcgacaaacaacttgggccttacaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaaagatatactcaagctgttagaaatttagaattcgacaaacaacttgggccttacaat 424

                                                                       
Query: 361 cttagccattatgaagattggaagcgattatcgaattttattactaagagtatcattgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cttagccattatgaagattggaagcgattatcgaattttattactaagagtatcattgaa 484

            
Query: 421 c 421
           |
Sbjct: 485 c 485


>gnl|LJGI|BP028776 
          Length = 351

 Score =  111 bits (56), Expect = 1e-23
 Identities = 56/56 (100%)
 Strand = Plus / Minus

                                                                    
Query: 1127 agtttgctccagtagttgagatgttggatgatgaagaagcgttagctgtttagtag 1182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351  agtttgctccagtagttgagatgttggatgatgaagaagcgttagctgtttagtag 296