Miyakogusa Predicted Gene

Lj2g3v2574420.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2574420.1 Non Chatacterized Hit- tr|F6HIZ0|F6HIZ0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,82.61,0.00000000000001,seg,NULL; coiled-coil,NULL,CUFF.39115.1
         (993 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74988 similar to UniRef100_A7PR79 Cluster: Chromosome...   767   0.0  

>gnl|LJGI|TC74988 similar to UniRef100_A7PR79 Cluster: Chromosome chr14 scaffold_26,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_26, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 542

 Score =  767 bits (387), Expect = 0.0
 Identities = 387/387 (100%)
 Strand = Plus / Plus

                                                                       
Query: 4   aagcggaagaaatggtcagaaacggaggagcaaacccttctatcaaaatactccgacctc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagcggaagaaatggtcagaaacggaggagcaaacccttctatcaaaatactccgacctc 60

                                                                       
Query: 64  ctccgttccggcacactaaccaagctcaaaacccgcgagaagaagttcaaacccatcgcc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctccgttccggcacactaaccaagctcaaaacccgcgagaagaagttcaaacccatcgcc 120

                                                                       
Query: 124 gaccacgtcaacgccgtccaccacctctacgaccccgccgccttccctttccgctggtcc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccacgtcaacgccgtccaccacctctacgaccccgccgccttccctttccgctggtcc 180

                                                                       
Query: 184 tggcgcgacgtctccatcaaggtccagaacatgcgccaccagtacctcggcgtcaagcag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggcgcgacgtctccatcaaggtccagaacatgcgccaccagtacctcggcgtcaagcag 240

                                                                       
Query: 244 aagatccgcctctcacctcaccacttcaactggaaggatggccctaaccactgggagaat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagatccgcctctcacctcaccacttcaactggaaggatggccctaaccactgggagaat 300

                                                                       
Query: 304 ttcctcaactacaaggaagtcttcggtgatgttcaacttgagtctaagagtggtggtaat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcctcaactacaaggaagtcttcggtgatgttcaacttgagtctaagagtggtggtaat 360

                                      
Query: 364 cgctctcgtgaattagggtttgagatc 390
           |||||||||||||||||||||||||||
Sbjct: 361 cgctctcgtgaattagggtttgagatc 387



 Score = 56.0 bits (28), Expect = 4e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 473 agagattggggttgggggttttgcggtt 500
           ||||||||||||||||||||||||||||
Sbjct: 473 agagattggggttgggggttttgcggtt 500