Miyakogusa Predicted Gene
- Lj2g3v2560030.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2560030.2 Non Chatacterized Hit- tr|H9VUV5|H9VUV5_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=C,81.97,0.00000000000002,seg,NULL,CUFF.39148.2
(1323 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65562 similar to UniRef100_A7PRD9 Cluster: Chromosome... 1114 0.0
gnl|LJGI|BP035570 homologue to UniRef100_A7PRD9 Cluster: Chromos... 880 0.0
gnl|LJGI|AU089203 similar to UniRef100_A7PRD9 Cluster: Chromosom... 238 7e-62
>gnl|LJGI|TC65562 similar to UniRef100_A7PRD9 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 985
Score = 1114 bits (562), Expect = 0.0
Identities = 571/574 (99%)
Strand = Plus / Plus
Query: 750 ggtcagcaagatgtataactttcctcttcgcatagttaaaggttctctttcagaaaataa 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggtcagcaagatgtataactttcctcttcgcatagttaaaggttctctttcagaaaataa 62
Query: 810 tgtaagaggtcaaatcatgcttgaaaagaatggaaaagccacagattcctttcctgggga 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgtaagaggtcaaatcatgcttgaaaagaatggaaaagccacagattcctttcctgggga 122
Query: 870 tgtgaccacagaacggattactgctcttcaggaagcttactggagtatggcatcagcact 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgtgaccacagaacggattactgctcttcaggaagcttactggagtatggcatcagcact 182
Query: 930 ttctgaagcagatggaattgattacactgatcctgaagagcttgagttgttgattacaac 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 183 ttctgaagcagatggaattgattacactgatcctgaagagcttgagttgttgattgcaac 242
Query: 990 tcttatagaccttgatgcaatggatggtaaacaaagtgtatctctgttagcagaatgttc 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcttatagaccttgatgcaatggatggtaaacaaagtgtatctctgttagcagaatgttc 302
Query: 1050 gagttcccctgatgtcagtactagacgcgctttagccaatgcactggcagcagcaccatc 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gagttcccctgatgtcagtactagacgcgctttagccaatgcactggcagcagcaccatc 362
Query: 1110 aatgtggactcttggaaatgcagggatgggggcattacagagactggcagaagatagcaa 1169
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aatgtgggctcttggaaatgcagggatgggggcattacagagactggcagaagatagcaa 422
Query: 1170 cccagctattgctgctgcagcatccaaagctatttatgaactgaaaaaacaatgggaaat 1229
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cccagctattgctgctgcagtatccaaagctatttatgaactgaaaaaacaatgggaaat 482
Query: 1230 agaggaaggggatagctggaggtttatgatgggcgcaaacaccgaggaagaaaaagaacg 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agaggaaggggatagctggaggtttatgatgggcgcaaacaccgaggaagaaaaagaacg 542
Query: 1290 cagagaatatgataatgaagaagataccaaataa 1323
||||||||||||||||||||||||||||||||||
Sbjct: 543 cagagaatatgataatgaagaagataccaaataa 576
>gnl|LJGI|BP035570 homologue to UniRef100_A7PRD9 Cluster: Chromosome chr14
scaffold_26, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_26, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 535
Score = 880 bits (444), Expect = 0.0
Identities = 458/465 (98%)
Strand = Plus / Plus
Query: 1 atggcacttactgcaaacaagatttcaagcggtcctatcgtgactaatagaacagctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atggcacttactgcaaacaagatttcaagcggtcctatcgtgactaatagaacagctatt 130
Query: 61 tgtagatcacatgnnnnnnnttgtgttttcgtatcaacaaggatcaacagaatacagcct 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tgtagatcacatgaaaaaaattgtgttttcgtatcaacaaggatcaacagaatacagcct 190
Query: 121 tcaaggcatagactggagcatggacatctgaagaatggatgtctcctcgaagagagatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcaaggcatagactggagcatggacatctgaagaatggatgtctcctcgaagagagatca 250
Query: 181 accttatccaatgactggttttggttcactaatagaaaaccagttagtttaacctccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 accttatccaatgactggttttggttcactaatagaaaaccagttagtttaacctccaag 310
Query: 241 aaatcttccatctcatgtaaatcaacaggagcaaataatactgaagagaaagaactcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaatcttccatctcatgtaaatcaacaggagcaaataatactgaagagaaagaactcatt 370
Query: 301 gcaacttatgatgatgtttctgatttaacgagattgcattccaaagatgagaaaaatgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gcaacttatgatgatgtttctgatttaacgagattgcattccaaagatgagaaaaatgac 430
Query: 361 cgcactcgttctattcacggcttggctgaagcttgtaaattcgttttcaatgatgcgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cgcactcgttctattcacggcttggctgaagcttgtaaattcgttttcaatgatgcgaag 490
Query: 421 tttctctctcgtggcataatgagcctggatgcccgtgcacgccaa 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tttctctctcgtggcataatgagcctggatgcccgtgcacgccaa 535
>gnl|LJGI|AU089203 similar to UniRef100_A7PRD9 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 492
Score = 238 bits (120), Expect = 7e-62
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 795 tctttcagaaaataatgtaagaggtcaaatcatgcttgaaaagaatggaaaagccacaga 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tctttcagaaaataatgtaagaggtcaaatcatgcttgaaaagaatggaaaagccacaga 68
Query: 855 ttcctttcctggggatgtgaccacagaacggattactgctcttcaggaagcttactggag 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ttcctttcctggggatgtgaccacagaacggattactgctcttcaggaagcttactggag 128
Score = 157 bits (79), Expect = 2e-37
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1245 ctggaggtttatgatgggcgcaaacaccgaggaagaaaaagaacgcagagaatatgataa 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctggaggtttatgatgggcgcaaacaccgaggaagaaaaagaacgcagagaatatgataa 182
Query: 1305 tgaagaagataccaaataa 1323
|||||||||||||||||||
Sbjct: 183 tgaagaagataccaaataa 201