Miyakogusa Predicted Gene

Lj2g3v2560020.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2560020.2 Non Chatacterized Hit- tr|I1MBW5|I1MBW5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,68.2,0,Zein-binding,Zein-binding domain; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; seg,NULL,CUFF.39085.2
         (2202 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77550 similar to UniRef100_A7P3R5 Cluster: Chromosome...   400   e-110
gnl|LJGI|DC598631                                                      84   4e-15

>gnl|LJGI|TC77550 similar to UniRef100_A7P3R5 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (16%)
          Length = 656

 Score =  400 bits (202), Expect = e-110
 Identities = 202/202 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2001 ggtctccattgaagaggaggttgatcatgtttatgagaggttacaatctcttgaaacaga 2060
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggtctccattgaagaggaggttgatcatgtttatgagaggttacaatctcttgaaacaga 60

                                                                        
Query: 2061 taaggagtttctccagcattgtatgggctccatacagaacggagataaaggaatggatct 2120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   taaggagtttctccagcattgtatgggctccatacagaacggagataaaggaatggatct 120

                                                                        
Query: 2121 gcttcaagaaatcttgcaacattttcgcgatcttaaggctgtggaactccgcttgaagac 2180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gcttcaagaaatcttgcaacattttcgcgatcttaaggctgtggaactccgcttgaagac 180

                                  
Query: 2181 catgggtaatgatcaactatag 2202
            ||||||||||||||||||||||
Sbjct: 181  catgggtaatgatcaactatag 202


>gnl|LJGI|DC598631 
          Length = 561

 Score = 83.8 bits (42), Expect = 4e-15
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1112 ctctatatcaagaactagaagaagagagaagtgcctctgcagtagctgccaaccagacaa 1171
            ||||||||  |||||||||||||||||||| ||| ||||| ||||| || || || ||||
Sbjct: 460  ctctatatgcagaactagaagaagagagaaatgcatctgctgtagcagcaaatcaaacaa 519

                                                      
Query: 1172 tggcaatgattacaaggctgcaagaagaaaaggcagcaatgc 1213
            ||||||||||||  ||||| || ||||| || ||||||||||
Sbjct: 520  tggcaatgattaacaggcttcaggaagagaaagcagcaatgc 561