Miyakogusa Predicted Gene
- Lj2g3v2558970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2558970.1 Non Chatacterized Hit- tr|I1MBV2|I1MBV2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,78.41,0,seg,NULL; Rad4 beta-hairpin domain,Rad4 beta-hairpin
domain 1; Rad4 beta-hairpin domain,Rad4 beta-ha,CUFF.39091.1
(2712 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67291 similar to UniRef100_A7PRD5 Cluster: Chromosome... 1384 0.0
gnl|LJGI|TC64218 similar to UniRef100_A7PRD5 Cluster: Chromosome... 1269 0.0
gnl|LJGI|TC63878 similar to UniRef100_A2Q387 Cluster: DNA repair... 963 0.0
gnl|LJGI|AV778467 weakly similar to UniRef100_A2Q387 Cluster: DN... 232 9e-60
>gnl|LJGI|TC67291 similar to UniRef100_A7PRD5 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 824
Score = 1384 bits (698), Expect = 0.0
Identities = 698/698 (100%)
Strand = Plus / Plus
Query: 20 caggagatgaaactagatccccgcatcgcccggaagaaacactgaccgaaatatctcggg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 caggagatgaaactagatccccgcatcgcccggaagaaacactgaccgaaatatctcggg 186
Query: 80 aggctgtgggaaaacttttacgccgtgctaataaagttggatcttccaagaaaaagaaca 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aggctgtgggaaaacttttacgccgtgctaataaagttggatcttccaagaaaaagaaca 246
Query: 140 agcctgaggttgagccagaaataaatggaagtcaagtttcggaacaaattcttcaaccac 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agcctgaggttgagccagaaataaatggaagtcaagtttcggaacaaattcttcaaccac 306
Query: 200 agacttcagaagttggacattgtggtggaaattccattggaaatgtttctgcagagaaga 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agacttcagaagttggacattgtggtggaaattccattggaaatgtttctgcagagaaga 366
Query: 260 agcgtaatcatgtaagtttaggccagggcttcttggatgaaaaggaagaactgcatgact 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agcgtaatcatgtaagtttaggccagggcttcttggatgaaaaggaagaactgcatgact 426
Query: 320 cagattgggaagatggtgcagttgctatggatgatcgtcctgtgactgttgaattgaatg 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cagattgggaagatggtgcagttgctatggatgatcgtcctgtgactgttgaattgaatg 486
Query: 380 tgacccctgattcagctgtacggaaacaaatacgtcgagcttctgctgaagataaggaat 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgacccctgattcagctgtacggaaacaaatacgtcgagcttctgctgaagataaggaat 546
Query: 440 tggctgaactagtgcacaaggctcatttgctttgtttacttgctcgtggaagattaatag 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tggctgaactagtgcacaaggctcatttgctttgtttacttgctcgtggaagattaatag 606
Query: 500 acagtgcttgtgatgatcctcttattcaggcttctttgctttctctacttccagcgcact 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 acagtgcttgtgatgatcctcttattcaggcttctttgctttctctacttccagcgcact 666
Query: 560 tgctccagctatcaaatgtcacagagctcacttcaaaagctttacatccgttaatagtat 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tgctccagctatcaaatgtcacagagctcacttcaaaagctttacatccgttaatagtat 726
Query: 620 ggttccatgataatttccatgttaaaaactgtgcaaatgaagacaagtcaccacactttg 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggttccatgataatttccatgttaaaaactgtgcaaatgaagacaagtcaccacactttg 786
Query: 680 ctttggcgtcagctttagaatcacatgaaggtagtcct 717
||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ctttggcgtcagctttagaatcacatgaaggtagtcct 824
>gnl|LJGI|TC64218 similar to UniRef100_A7PRD5 Cluster: Chromosome chr14 scaffold_26,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_26, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 748
Score = 1269 bits (640), Expect = 0.0
Identities = 640/640 (100%)
Strand = Plus / Plus
Query: 1 atgtttcctgtcaaactggcaggagatgaaactagatccccgcatcgcccggaagaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atgtttcctgtcaaactggcaggagatgaaactagatccccgcatcgcccggaagaaaca 168
Query: 61 ctgaccgaaatatctcgggaggctgtgggaaaacttttacgccgtgctaataaagttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ctgaccgaaatatctcgggaggctgtgggaaaacttttacgccgtgctaataaagttgga 228
Query: 121 tcttccaagaaaaagaacaagcctgaggttgagccagaaataaatggaagtcaagtttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tcttccaagaaaaagaacaagcctgaggttgagccagaaataaatggaagtcaagtttcg 288
Query: 181 gaacaaattcttcaaccacagacttcagaagttggacattgtggtggaaattccattgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gaacaaattcttcaaccacagacttcagaagttggacattgtggtggaaattccattgga 348
Query: 241 aatgtttctgcagagaagaagcgtaatcatgtaagtttaggccagggcttcttggatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aatgtttctgcagagaagaagcgtaatcatgtaagtttaggccagggcttcttggatgaa 408
Query: 301 aaggaagaactgcatgactcagattgggaagatggtgcagttgctatggatgatcgtcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aaggaagaactgcatgactcagattgggaagatggtgcagttgctatggatgatcgtcct 468
Query: 361 gtgactgttgaattgaatgtgacccctgattcagctgtacggaaacaaatacgtcgagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gtgactgttgaattgaatgtgacccctgattcagctgtacggaaacaaatacgtcgagct 528
Query: 421 tctgctgaagataaggaattggctgaactagtgcacaaggctcatttgctttgtttactt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tctgctgaagataaggaattggctgaactagtgcacaaggctcatttgctttgtttactt 588
Query: 481 gctcgtggaagattaatagacagtgcttgtgatgatcctcttattcaggcttctttgctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gctcgtggaagattaatagacagtgcttgtgatgatcctcttattcaggcttctttgctt 648
Query: 541 tctctacttccagcgcacttgctccagctatcaaatgtcacagagctcacttcaaaagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tctctacttccagcgcacttgctccagctatcaaatgtcacagagctcacttcaaaagct 708
Query: 601 ttacatccgttaatagtatggttccatgataatttccatg 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ttacatccgttaatagtatggttccatgataatttccatg 748
>gnl|LJGI|TC63878 similar to UniRef100_A2Q387 Cluster: DNA repair protein Rad4; n=1;
Medicago truncatula|Rep: DNA repair protein Rad4 -
Medicago truncatula (Barrel medic), partial (22%)
Length = 761
Score = 963 bits (486), Expect = 0.0
Identities = 500/507 (98%)
Strand = Plus / Plus
Query: 2206 gattatgcgcccgctatggttggttttgaatttagaaatggccgttcatatcctgtcttt 2265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gattatgcgcccgctatggttggttttgaatttagaaatggccgttcatatcctgtcttt 60
Query: 2266 gatggtattgtggtctgtgctgagttcaaggatgcacttctagaggcatatgcagaggaa 2325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatggtattgtggtctgtgctgagttcaaggatgcacttctagaggcatatgcagaggaa 120
Query: 2326 gaggaaagacgtcaggctgatgagaagagaagggatgaagcccaagctcttaatcggtgg 2385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggaaagacgtcaggctgatgagaagagaagggatgaagcccaagctcttaatcggtgg 180
Query: 2386 taccagcttctttcatccatcgtaactcgtcaaaggttaaataatcgttataacagccat 2445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taccagcttctttcatccatcgtaactcgtcaaaggttaaataatcgttataacagccat 240
Query: 2446 ttgtcatcagagatgccatctgatgtccaatgcatgaatgataatgtgtcaaatgccaca 2505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtcatcagagatgccatctgatgtccaatgcatgaatgataatgtgtcaaatgccaca 300
Query: 2506 gcttgtggtagttccgacgagaatcagaacccaagacaccatcaggtggagaaatgcgat 2565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcttgtggtagttccgacgagaatcagaacccaagacaccatcaggtggagaaatgcgat 360
Query: 2566 gcagattttgatgcatcgttaagtactccagtaaaggaccatgagcatgnnnnnnngaaa 2625
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 gcagattttgatgcatcgttaagtactccagtaaaggaccatgagcatgtttttttgaaa 420
Query: 2626 gagtacgagagctttgataagggaacctctctattgaccaagcgatgtcaatgtggattt 2685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagtacgagagctttgataagggaacctctctattgaccaagcgatgtcaatgtggattt 480
Query: 2686 tcagtccaagtagaagaattatagtat 2712
|||||||||||||||||||||||||||
Sbjct: 481 tcagtccaagtagaagaattatagtat 507
>gnl|LJGI|AV778467 weakly similar to UniRef100_A2Q387 Cluster: DNA repair protein Rad4;
n=1; Medicago truncatula|Rep: DNA repair protein Rad4 -
Medicago truncatula (Barrel medic), partial (8%)
Length = 491
Score = 232 bits (117), Expect = 9e-60
Identities = 173/194 (89%)
Strand = Plus / Minus
Query: 2519 ccgacgagaatcagaacccaagacaccatcaggtggagaaatgcgatgcagattttgatg 2578
|||||||||||||| |||| |||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 491 ccgacgagaatcagtaccccagaccccatccggtggagatatgcgatgcagattttgatg 432
Query: 2579 catcgttaagtactccagtaaaggaccatgagcatgnnnnnnngaaagagtacgagagct 2638
|||||||||||||||| || ||||||| ||||| || | |||||||||||||||
Sbjct: 431 catcgttaagtactcccgtcaaggaccctgagcctgtttttttgtaagagtacgagagct 372
Query: 2639 ttgataagggaacctctctattgaccaagcgatgtcaatgtggattttcagtccaagtag 2698
|||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||
Sbjct: 371 ttgataagggaacctctctattgacccagcgatgtccatgtggattttcagtcccagtag 312
Query: 2699 aagaattatagtat 2712
||| ||||||||||
Sbjct: 311 aaggattatagtat 298