Miyakogusa Predicted Gene

Lj2g3v2540620.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2540620.1 tr|G7KG16|G7KG16_MEDTR PHD finger protein
OS=Medicago truncatula GN=MTR_5g077750 PE=4 SV=1,76.6,0,no
description,Zinc finger, RING/FYVE/PHD-type; seg,NULL; MMD1 (MALE
MEIOCYTE DEATH 1), DNA BINDING,,CUFF.39062.1
         (2067 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74204 similar to UniRef100_A7QR23 Cluster: Chromosome...    54   4e-06

>gnl|LJGI|TC74204 similar to UniRef100_A7QR23 Cluster: Chromosome undetermined
            scaffold_147, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_147, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (14%)
          Length = 611

 Score = 54.0 bits (27), Expect = 4e-06
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1837 gatgatgatggggagagaatggtggcttgtgacatttgtgaggtgtggcagcatacaagg 1896
            ||||||||||| || |||||| ||||||||||  ||||||  ||||||| ||| ||||||
Sbjct: 165  gatgatgatggcgaaagaatgatggcttgtgatttttgtggagtgtggcggcacacaagg 224

               
Query: 1897 tgt 1899
            |||
Sbjct: 225  tgt 227