Miyakogusa Predicted Gene
- Lj2g3v2538590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2538590.1 Non Chatacterized Hit- tr|Q8W5G1|Q8W5G1_ORYSJ
Putative parathymosin OS=Oryza sativa subsp. japonica
,30.26,4e-18,seg,NULL; SWIB/MDM2 domain,SWIB/MDM2 domain; no
description,NULL; SWIB,SWIB/MDM2 domain; DEK_C,DEK,
,NODE_33998_length_1421_cov_98.252640.path2.1
(993 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58803 similar to UniRef100_A7QZX7 Cluster: Chromosome... 722 0.0
gnl|LJGI|TC61212 similar to UniRef100_A7QZX7 Cluster: Chromosome... 704 0.0
gnl|LJGI|TC75769 similar to UniRef100_A7QZX7 Cluster: Chromosome... 404 e-112
gnl|LJGI|FS357735 similar to UniRef100_A7QZX7 Cluster: Chromosom... 283 1e-75
gnl|LJGI|BP067569 UniRef100_A7USE8 Cluster: AGAP000450-PA; n=1; ... 180 1e-44
gnl|LJGI|TC79389 145 6e-34
gnl|LJGI|BW598635 103 2e-21
>gnl|LJGI|TC58803 similar to UniRef100_A7QZX7 Cluster: Chromosome undetermined
scaffold_292, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_292,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 902
Score = 722 bits (364), Expect = 0.0
Identities = 370/372 (99%)
Strand = Plus / Plus
Query: 383 atgtccctcgcaatgaagctcccaaggatagtactcaaactaagccgaagagaagaggtg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atgtccctcgcaatgaagctcccaaggatagtactcaaactaagccgaagagaagaggtg 590
Query: 443 gccctggaggtctcaacaaactttgtggtgtttcacctgaactacaggtcattgttggcc 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gccctggaggtctcaacaaactttgtggtgtttcacctgaactacaggtcattgttggcc 650
Query: 503 agccagcattgccaaggactgagatcgtaaagcaactctgggcttacataaggaaaaaca 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 agccagcattgccaaggactgagatcgtaaagcaactctgggcttacataaggaaaaaca 710
Query: 563 atctccaagatcctagcaacaaaaggaaaataatttgcaatgatgaactgcccgtggtgt 622
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 711 atctccaagatcctagcaacaaaaggaaaataatttgcaatgatgaactgcgcgtggtgt 770
Query: 623 ttgagacggattgtactgatatgttcaagatgaataagttactagctaaacacataatcg 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ttgagacggattgtactgatatgttcaagatgaataagttactagctaaacacataatcg 830
Query: 683 cccttgaaccaagcaaacagcctgctccaaagaggcagaaggtagatgtggagtcaggaa 742
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 831 cccttgaaccaagcaaacagcctgctccaaaaaggcagaaggtagatgtggagtcaggaa 890
Query: 743 ccaaaagtgctg 754
||||||||||||
Sbjct: 891 ccaaaagtgctg 902
Score = 704 bits (355), Expect = 0.0
Identities = 355/355 (100%)
Strand = Plus / Plus
Query: 1 atggtggttacagaggaagaaatatcggaagcattgcaatctctccttcgagaatcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atggtggttacagaggaagaaatatcggaagcattgcaatctctccttcgagaatcaaac 208
Query: 61 cctagaagaccaacattcaccacgctcaaccaagtgcttcaccagcttcaaaccaacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cctagaagaccaacattcaccacgctcaaccaagtgcttcaccagcttcaaaccaacctc 268
Query: 121 ggccacgacctctctcacaagctcgatttcatcgccgctcagatcaacctcctcctcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggccacgacctctctcacaagctcgatttcatcgccgctcagatcaacctcctcctcgct 328
Query: 181 caacaacaaccgccgccgcagaggcaacaaccccatcagcaccaaccaccacctccgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 caacaacaaccgccgccgcagaggcaacaaccccatcagcaccaaccaccacctccgaaa 388
Query: 241 gaccattttgcccttcaccaaaaccctaattacccccatggacctgtcacttcctcgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaccattttgcccttcaccaaaaccctaattacccccatggacctgtcacttcctcgttt 448
Query: 301 cagaccttctcttccaaccctgttcccgctgtcgctgaggctgctcgcactgaag 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cagaccttctcttccaaccctgttcccgctgtcgctgaggctgctcgcactgaag 503
>gnl|LJGI|TC61212 similar to UniRef100_A7QZX7 Cluster: Chromosome undetermined
scaffold_292, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_292,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 806
Score = 704 bits (355), Expect = 0.0
Identities = 355/355 (100%)
Strand = Plus / Plus
Query: 1 atggtggttacagaggaagaaatatcggaagcattgcaatctctccttcgagaatcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggtggttacagaggaagaaatatcggaagcattgcaatctctccttcgagaatcaaac 188
Query: 61 cctagaagaccaacattcaccacgctcaaccaagtgcttcaccagcttcaaaccaacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cctagaagaccaacattcaccacgctcaaccaagtgcttcaccagcttcaaaccaacctc 248
Query: 121 ggccacgacctctctcacaagctcgatttcatcgccgctcagatcaacctcctcctcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggccacgacctctctcacaagctcgatttcatcgccgctcagatcaacctcctcctcgct 308
Query: 181 caacaacaaccgccgccgcagaggcaacaaccccatcagcaccaaccaccacctccgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caacaacaaccgccgccgcagaggcaacaaccccatcagcaccaaccaccacctccgaaa 368
Query: 241 gaccattttgcccttcaccaaaaccctaattacccccatggacctgtcacttcctcgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaccattttgcccttcaccaaaaccctaattacccccatggacctgtcacttcctcgttt 428
Query: 301 cagaccttctcttccaaccctgttcccgctgtcgctgaggctgctcgcactgaag 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cagaccttctcttccaaccctgttcccgctgtcgctgaggctgctcgcactgaag 483
Score = 579 bits (292), Expect = e-164
Identities = 295/296 (99%)
Strand = Plus / Plus
Query: 383 atgtccctcgcaatgaagctcccaaggatagtactcaaactaagccgaagagaagaggtg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atgtccctcgcaatgaagctcccaaggatagtactcaaactaagccgaagagaagaggtg 570
Query: 443 gccctggaggtctcaacaaactttgtggtgtttcacctgaactacaggtcattgttggcc 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gccctggaggtctcaacaaactttgtggtgtttcacctgaactacaggtcattgttggcc 630
Query: 503 agccagcattgccaaggactgagatcgtaaagcaactctgggcttacataaggaaaaaca 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 agccagcattgccaaggactgagatcgtaaagcaactctgggcttacataaggaaaaaca 690
Query: 563 atctccaagatcctagcaacaaaaggaaaataatttgcaatgatgaactgcccgtggtgt 622
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 691 atctccaagatcctagcaacaaaaggaaaataatttgcaatgatgaactgcgcgtggtgt 750
Query: 623 ttgagacggattgtactgatatgttcaagatgaataagttactagctaaacacata 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttgagacggattgtactgatatgttcaagatgaataagttactagctaaacacata 806
>gnl|LJGI|TC75769 similar to UniRef100_A7QZX7 Cluster: Chromosome undetermined
scaffold_292, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_292,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 642
Score = 404 bits (204), Expect = e-112
Identities = 254/272 (93%), Gaps = 2/272 (0%)
Strand = Plus / Plus
Query: 724 gtagatgtggagtcaggaaccaaaagtgctgaacctgctccttctgtgataatatctgat 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagatgtggagtcaggaaccaaaagtgctgaacctgctccttctgtgataatatctgat 60
Query: 784 acacttgccaacttttttggcgttactggaagggagatgctacagtcagagggtctgcgg 843
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 61 acacttgccaacttttttggcgttactggaagggagatgctacagtcagaggttctgagg 120
Query: 844 cggctctnnnnnnncattaaggtcttata--tggaagatcctgtgaatcctatggcaatt 901
|| ||| |||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 121 cgtatctgggagtacattaaggtcaagcagttggaggatcctgtgaatcctatggcaatt 180
Query: 902 atgtgcgatgcaaagcttcaggagatctttggctgcgaaagcatttcagcattggggata 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtgcgatgcaaagcttcaggagatctttggctgcgaaagcatttcagcattggggata 240
Query: 962 ccagaagttttgggccgtcatcatatttttag 993
||||||||||||||||||||||||||||||||
Sbjct: 241 ccagaagttttgggccgtcatcatatttttag 272
>gnl|LJGI|FS357735 similar to UniRef100_A7QZX7 Cluster: Chromosome undetermined
scaffold_292, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_292,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 583
Score = 283 bits (143), Expect = 1e-75
Identities = 196/215 (91%), Gaps = 2/215 (0%)
Strand = Plus / Minus
Query: 781 gatacacttgccaacttttttggcgttactggaagggagatgctacagtcagagggtctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 583 gatacacttgccaacttttttggcgttactggaagggagatgctacagtcagaggttttg 524
Query: 841 cggcggctctnnnnnnncattaaggtcttata--tggaagatcctgtgaatcctatggca 898
|||| ||| |||||||||| | |||| |||||||||||||||||||||
Sbjct: 523 aggcgtatctgggagtacattaaggtcaagcagttggaggatcctgtgaatcctatggca 464
Query: 899 attatgtgcgatgcaaagcttcaggagatctttggctgcgaaagcatttcagcattgggg 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 attatgtgcgatgcaaagcttcaggagatctttggctgcgaaagcatttcagcattgggg 404
Query: 959 ataccagaagttttgggccgtcatcatatttttag 993
|||||||||||||||||||||||||||||||||||
Sbjct: 403 ataccagaagttttgggccgtcatcatatttttag 369
>gnl|LJGI|BP067569 UniRef100_A7USE8 Cluster: AGAP000450-PA; n=1; Anopheles gambiae
str. PEST|Rep: AGAP000450-PA - Anopheles gambiae str.
PEST, partial (24%)
Length = 159
Score = 180 bits (91), Expect = 1e-44
Identities = 97/99 (97%)
Strand = Plus / Plus
Query: 3 ggtggttacagaggaagaaatatcggaagcattgcaatctctccttcgagaatcaaaccc 62
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 ggtggttacagaggaagaaatatcggaagcatcgcaatctctccttcgagaatcaaaccc 120
Query: 63 tagaagaccaacattcaccacgctcaaccaagtgcttca 101
||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 tagaagaccaacattcaccacgctcaagcaagtgcttca 159
>gnl|LJGI|TC79389
Length = 793
Score = 145 bits (73), Expect = 6e-34
Identities = 184/221 (83%)
Strand = Plus / Plus
Query: 457 aacaaactttgtggtgtttcacctgaactacaggtcattgttggccagccagcattgcca 516
|||||| | ||||||||||| |||||||| ||| ||||||||| || | | |||||
Sbjct: 508 aacaaagtgtgtggtgtttctcctgaacttcagccaattgttggcgagtccgagctgcca 567
Query: 517 aggactgagatcgtaaagcaactctgggcttacataaggaaaaacaatctccaagatcct 576
|| |||||||| || | || || ||||| ||||||||||||||||| ||||||||||||
Sbjct: 568 agaactgagattgtgagacagctttgggcatacataaggaaaaacaacctccaagatcct 627
Query: 577 agcaacaaaaggaaaataatttgcaatgatgaactgcccgtggtgtttgagacggattgt 636
| |||||||| || ||||| || |||||| |||| |||||||||||||| || ||
Sbjct: 628 ggtaacaaaagaaagataatctgtgatgatgctctgcgtgtggtgtttgagacagactgc 687
Query: 637 actgatatgttcaagatgaataagttactagctaaacacat 677
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 688 actgacatgttcaagatgaataagttactagctaaacacat 728
>gnl|LJGI|BW598635
Length = 480
Score = 103 bits (52), Expect = 2e-21
Identities = 97/112 (86%)
Strand = Plus / Plus
Query: 566 tccaagatcctagcaacaaaaggaaaataatttgcaatgatgaactgcccgtggtgtttg 625
||||||||||| | |||||||| || ||||| || |||||| |||| ||||||||||
Sbjct: 174 tccaagatcctggtaacaaaagaaagataatctgtgatgatgctctgcgtgtggtgtttg 233
Query: 626 agacggattgtactgatatgttcaagatgaataagttactagctaaacacat 677
|||| || || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 234 agacagactgcactgacatgttcaagatgaataagttactagctaaacacat 285