Miyakogusa Predicted Gene
- Lj2g3v2532270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2532270.1 CUFF.39043.1
(1524 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57138 homologue to UniRef100_A8C8H3 Cluster: Glutamat... 900 0.0
gnl|LJGI|TC59495 UniRef100_Q684J8 Cluster: Glutamate decarboxyla... 563 e-159
gnl|LJGI|TC69785 similar to UniRef100_Q6Q4I2 Cluster: Glutamate ... 111 1e-23
gnl|LJGI|TC76306 similar to UniRef100_A8C8H3 Cluster: Glutamate ... 70 4e-11
>gnl|LJGI|TC57138 homologue to UniRef100_A8C8H3 Cluster: Glutamate decarboxylase; n=1;
Glycine max|Rep: Glutamate decarboxylase - Glycine max
(Soybean), partial (96%)
Length = 1776
Score = 900 bits (454), Expect = 0.0
Identities = 1119/1345 (83%), Gaps = 9/1345 (0%)
Strand = Plus / Plus
Query: 46 tcaaccttcgcctcccgttatgtccgcaccgcacttcccaggttcaagatggcggagcag 105
|||||||| || ||||| |||||| | ||| |||||||||||||||||||| | | ||
Sbjct: 103 tcaacctttgcttcccgctatgtcaggacctcacttcccaggttcaagatgcctcaagag 162
Query: 106 tcgatcccaaaggaagcggcatcccagatcataaacgacgagctgatgctggatgggaat 165
|| || || ||||| || |||| |||||||||||| || ||| ||||||||||||| ||
Sbjct: 163 tcaataccgaaggaggcagcataccagatcataaatgatgagttgatgctggatggaaac 222
Query: 166 ccaaggctgaacctggcgtcgttcgtgacaacttggatggagccagaatgtgacaagctc 225
||||| |||| || || || || ||||| |||||||||||||| || ||||||||||||
Sbjct: 223 ccaagattgaatctagcatcatttgtgaccacttggatggagcctgagtgtgacaagctc 282
Query: 226 atcatggcttccattaacaaaaactatgtcgacatggatgaataccctgtcaccactgag 285
|||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 283 atcatggcttccattaacaagaactatgttgacatggatgagtaccctgttaccaccgag 342
Query: 286 ctccagaatcgatgtgttaatatgatagctcatcttttcaatgccccacttggagaatca 345
|| |||||||| ||||| || |||||||| |||||||| ||||| ||||||||||| ||
Sbjct: 343 cttcagaatcggtgtgtgaacatgatagcacatctttttaatgcaccacttggagactct 402
Query: 346 gaaactgccgttggtgttggcacggtggggtcttcagaggccatcatgttggctggattg 405
|| |||| ||||||| || || || ||||||||||| |||||||||||||||
Sbjct: 403 gatactg---------ttggcactgttggctcatcagaggccataatgttggctggattg 453
Query: 406 gcattcaagaggaagtggcaaaacaaaaggagaagtgaaggcaaacctgttgacaatccc 465
|||||||| || | |||||| |||| ||||| | || || ||||| |||||| |||
Sbjct: 454 gcattcaaaagaacgtggcagaacagaaggaaagcagagggaaaaccccatgacaagccc 513
Query: 466 aacattgtcactggtgccaatgttcaggtttgctgggagaaatttgcaaggtactttgag 525
||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 514 aacattgtcaccggagccaacgttcaggtttgctgggagaaatttgcaagatactttgag 573
Query: 526 gtggagttgaaagaggttaagctgagtgaaggttactatgtagtggaccccgaaaaggct 585
||||||||||||||||| ||||||||||| || ||||||||| ||||||| ||||||||
Sbjct: 574 gtggagttgaaagaggtgaagctgagtgagggatactatgtaatggaccctcaaaaggct 633
Query: 586 gtggaaatggtggatcagaacaccatttgtgttgctgctatccttggttccacactaaat 645
||||| |||| ||| ||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 634 gtggatttggtagatgagaacaccatttgtgttgctgctattcttggttccacattaaat 693
Query: 646 ggagagtttgaagatgtcaaatgcctaaacgatctcctcatnnnnnnnnntaacgaaaca 705
|||||||||||||||||||| || |||| ||||| || || || |||||
Sbjct: 694 ggagagtttgaagatgtcaagcgcttaaatgatcttctaattgaaaagaacaaggaaact 753
Query: 706 ggatgggacactcctattcatgtggatgcagcaagtggtggattcattgctccatttctc 765
||||||||||||||||||||||| |||||||| ||||| || |||||||| || ||| |
Sbjct: 754 ggatgggacactcctattcatgttgatgcagctagtggcggcttcattgccccgtttatt 813
Query: 766 tatccagagcttgagtgggatttccgtttaccactagtgaagagcatcaatgttagtgga 825
|||||||||||||||||||| || || ||||||||||||||||||||||| ||||||||
Sbjct: 814 tatccagagcttgagtgggactttcgcttaccactagtgaagagcatcaacgttagtggc 873
Query: 826 cacaaatatggtcttgtctatgctggcattggttgggtcatttggagaagcaaggaagac 885
||||| |||||||| ||||||||||| ||||||||||| || ||||||| |||||| |||
Sbjct: 874 cacaagtatggtctagtctatgctggaattggttgggttatctggagaaacaaggaggac 933
Query: 886 cttcctgaggaactcatctttcacattaactatcttggagctgatcaacctacattcact 945
| ||||||||||||||||| || || |||||||| |||||||||||||| || |||||
Sbjct: 934 ttgcctgaggaactcatcttccatatcaactatctcggagctgatcaacccaccttcacc 993
Query: 946 ctcaacttctccaaaggttctagccaagttattgctcagtactaccagctaattcgtttg 1005
||||||||||||||||||||||||||| | || ||||| |||||||| |||||||| |
Sbjct: 994 ctcaacttctccaaaggttctagccaaatcatagctcaatactaccaactaattcgcctt 1053
Query: 1006 ggtcatgagggatacagaaatgtaatggaaaactgcaaagacaacatggtggtactaaag 1065
||| ||||||| || | | |||| ||||||||||||| |||||||||| | ||||||||
Sbjct: 1054 ggttatgagggctataaacatgtgatggaaaactgcagagacaacatgttagtactaaaa 1113
Query: 1066 gaaggtctggataaaacaggtcgctttgacattgtgtccaaagatgagggtgtgccattg 1125
|| || || | ||||| ||||||||||| |||||||||||||| | |||||||| ||
Sbjct: 1114 gaggggcttcaaaaaactggtcgctttgaaattgtgtccaaagacaatggtgtgcctctg 1173
Query: 1126 gtggcattcactttgaaggaccacagcaacttcaatgagttccaagtctctgatatgctg 1185
||||| ||||| |||||||||||| ||| ||||| |||||| |||| || ||||
Sbjct: 1174 gtggccttcacactgaaggaccacacacactataatgaattccaaatctcagactcgctg 1233
Query: 1186 aggcgctatggctggatagtgccagcatacaccatgcccccagatgcagaacatgttacc 1245
||||||| || ||||||||||| ||||||| |||||||||| || | | || || |||
Sbjct: 1234 aggcgcttcgggtggatagtgccggcatacagcatgcccccaaatactcagcacgtgacc 1293
Query: 1246 gtgctccgcgttgtgatcagggaggacttttcccgcaccctcgcagagcgtctcgtgatt 1305
||| |||| || || || ||||||||||| || | ||||| ||||||||||| ||| |
Sbjct: 1294 gtggtccgtgtagtcattagggaggacttctcaaggaccctagcagagcgtcttgtggct 1353
Query: 1306 gacatcaccaaagtgttgcatgagctggatcttctccctgcaagggtggtcactagcagc 1365
|| || |||||| |||| ||||| ||| ||||||||||||||| | | ||||| |
Sbjct: 1354 gatattgagaaagtgctgcacgagcttgattcactccctgcaagggtgataagtagcacc 1413
Query: 1366 actgttactgttattggagaagaag 1390
||||| ||||||| ||||||||||
Sbjct: 1414 actgtgactgttaccggagaagaag 1438
>gnl|LJGI|TC59495 UniRef100_Q684J8 Cluster: Glutamate decarboxylase 1; n=1; Lotus
japonicus|Rep: Glutamate decarboxylase 1 - Lotus
japonicus, partial (57%)
Length = 800
Score = 563 bits (284), Expect = e-159
Identities = 536/620 (86%)
Strand = Plus / Plus
Query: 46 tcaaccttcgcctcccgttatgtccgcaccgcacttcccaggttcaagatggcggagcag 105
|||||||| || ||||| |||||| | ||| |||||||||||||||||||| | | ||
Sbjct: 124 tcaacctttgcttcccgctatgtcaggacctcacttcccaggttcaagatgcctcaagag 183
Query: 106 tcgatcccaaaggaagcggcatcccagatcataaacgacgagctgatgctggatgggaat 165
|| || || ||||| || |||| |||||||||||| || ||| ||||||||||||| ||
Sbjct: 184 tcaataccgaaggaggcagcataccagatcataaatgatgagttgatgctggatggaaac 243
Query: 166 ccaaggctgaacctggcgtcgttcgtgacaacttggatggagccagaatgtgacaagctc 225
||||| |||| || || || || ||||| |||||||||||||| || ||||||||||||
Sbjct: 244 ccaagattgaatctagcatcatttgtgaccacttggatggagcctgagtgtgacaagctc 303
Query: 226 atcatggcttccattaacaaaaactatgtcgacatggatgaataccctgtcaccactgag 285
|||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 304 atcatggcttccattaacaagaactatgttgacatggatgagtaccctgttaccaccgag 363
Query: 286 ctccagaatcgatgtgttaatatgatagctcatcttttcaatgccccacttggagaatca 345
|| |||||||| ||||| || |||||||| |||||||| ||||| ||||||||||| ||
Sbjct: 364 cttcagaatcggtgtgtgaacatgatagcacatctttttaatgcaccacttggagactct 423
Query: 346 gaaactgccgttggtgttggcacggtggggtcttcagaggccatcatgttggctggattg 405
|| ||||| |||||||||||||| || || || ||||||||||| |||||||||||||||
Sbjct: 424 gatactgcagttggtgttggcactgttggctcatcagaggccataatgttggctggattg 483
Query: 406 gcattcaagaggaagtggcaaaacaaaaggagaagtgaaggcaaacctgttgacaatccc 465
|||||||| || | |||||| |||| ||||| | || || ||||| |||||| |||
Sbjct: 484 gcattcaaaagaacgtggcagaacagaaggaaagcagagggaaaaccccatgacaagccc 543
Query: 466 aacattgtcactggtgccaatgttcaggtttgctgggagaaatttgcaaggtactttgag 525
||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 544 aacattgtcaccggagccaacgttcaggtttgctgggagaaatttgcaagatactttgag 603
Query: 526 gtggagttgaaagaggttaagctgagtgaaggttactatgtagtggaccccgaaaaggct 585
||||||||||||||||| ||||||||||| || ||||||||| ||||||| ||||||||
Sbjct: 604 gtggagttgaaagaggtgaagctgagtgagggatactatgtaatggaccctcaaaaggct 663
Query: 586 gtggaaatggtggatcagaacaccatttgtgttgctgctatccttggttccacactaaat 645
||||| |||| ||| ||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 664 gtggatttggtagatgagaacaccatttgtgttgctgctattcttggttccacattaaat 723
Query: 646 ggagagtttgaagatgtcaa 665
||||||||||||||||||||
Sbjct: 724 ggagagtttgaagatgtcaa 743
>gnl|LJGI|TC69785 similar to UniRef100_Q6Q4I2 Cluster: Glutamate decarboxylase 4a;
n=1; Brassica juncea|Rep: Glutamate decarboxylase 4a -
Brassica juncea (Leaf mustard) (Indian mustard), partial
(43%)
Length = 814
Score = 111 bits (56), Expect = 1e-23
Identities = 389/500 (77%)
Strand = Plus / Plus
Query: 124 gcatcccagatcataaacgacgagctgatgctggatgggaatccaaggctgaacctggcg 183
|||| ||||| |||| |||| ||||||| ||| |||| |||||||| | ||||| ||||
Sbjct: 250 gcataccagaacatacacgatgagctgaagcttgatgcgaatccaaagatgaacttggct 309
Query: 184 tcgttcgtgacaacttggatggagccagaatgtgacaagctcatcatggcttccattaac 243
|| || || || || | |||||| ||||||| |||||||||| |||| ||||| |||
Sbjct: 310 tcctttgtaaccacatccatggaggaagaatgtaacaagctcatgatggaatccatcaac 369
Query: 244 aaaaactatgtcgacatggatgaataccctgtcaccactgagctccagaatcgatgtgtt 303
|| |||||||| ||||||||||| ||||||| |||||||| || || |||||||||||
Sbjct: 370 aagaactatgtagacatggatgagtaccctgctaccactgatcttcataatcgatgtgta 429
Query: 304 aatatgatagctcatcttttcaatgccccacttggagaatcagaaactgccgttggtgtt 363
|| |||||||| | | | ||| |||| | |||||||| || | ||| |||| |
Sbjct: 430 aacatgatagcacgtttgttccatgctgaaattggagaaaatgagagtgcaattggagca 489
Query: 364 ggcacggtggggtcttcagaggccatcatgttggctggattggcattcaagaggaagtgg 423
|| || || || || || |||||||| ||| |||| || | || ||||||| || ||||
Sbjct: 490 ggaactgttggatcatctgaggccataatgctggcaggccttgccttcaagaagaggtgg 549
Query: 424 caaaacaaaaggagaagtgaaggcaaacctgttgacaatcccaacattgtcactggtgcc 483
|| ||||| | | ||| ||||| || ||| || |||||||||||||| ||||||
Sbjct: 550 cagaacaagcgcaaggctgagggcaagccctatgataagcccaacattgtcacaggtgcc 609
Query: 484 aatgttcaggtttgctgggagaaatttgcaaggtactttgaggtggagttgaaagaggtt 543
||||| ||||| || ||| |||||||||| || || ||||| |||||||||| ||| ||
Sbjct: 610 aatgtgcaggtatgttggaagaaatttgctagttattttgatgtggagttgagagaagtg 669
Query: 544 aagctgagtgaaggttactatgtagtggaccccgaaaaggctgtggaaatggtggatcag 603
|||||||||||||| |||| || ||||||| | ||||| || || ||||||||| |
Sbjct: 670 aagctgagtgaaggcaactacgtgatggaccctgccaaggccgttgagatggtggatgaa 729
Query: 604 aacaccatttgtgttgctgc 623
||||| |||||||| |||||
Sbjct: 730 aacacaatttgtgtggctgc 749
>gnl|LJGI|TC76306 similar to UniRef100_A8C8H3 Cluster: Glutamate decarboxylase; n=1;
Glycine max|Rep: Glutamate decarboxylase - Glycine max
(Soybean), partial (12%)
Length = 455
Score = 69.9 bits (35), Expect = 4e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1425 taagaggagtgctatggagactcagagggaaatcacttcagtttggaagaaatttgtgat 1484
||||| ||||||||| ||||| ||||||||||||||| || |||||||||| |||||| |
Sbjct: 107 taagaagagtgctattgagacacagagggaaatcactacactttggaagaattttgtgtt 166
Query: 1485 gga 1487
|||
Sbjct: 167 gga 169