Miyakogusa Predicted Gene

Lj2g3v2522130.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2522130.2 Non Chatacterized Hit- tr|I3S8P0|I3S8P0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.45,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; ANDROGEN INDUCED INHIBITOR OF PROLIFERATION
(AS3) / PDS5-RELATED,CUFF.39039.2
         (546 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76146 weakly similar to UniRef100_A7P5X1 Cluster: Chr...  1074   0.0  
gnl|LJGI|GO009929 similar to UniRef100_A7P5X1 Cluster: Chromosom...    56   2e-07

>gnl|LJGI|TC76146 weakly similar to UniRef100_A7P5X1 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (19%)
          Length = 1164

 Score = 1074 bits (542), Expect = 0.0
 Identities = 545/546 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttgcaataaagctcacggacaaggagctccgaatggaaaaggagcttctggaagca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  atggttgcaataaagctcacggacaaggagctccgaatggaaaaggagcttctggaagca 156

                                                                       
Query: 61  ggaagcaagcttgcagatcctccatcatctgttgatgagctcttgaatctcttagaccgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ggaagcaagcttgcagatcctccatcatctgttgatgagctcttgaatctcttagaccgg 216

                                                                       
Query: 121 gtcgagtgttgtgtgtctagtgtggaacagtcacatactgagcctatgcttattgcactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gtcgagtgttgtgtgtctagtgtggaacagtcacatactgagcctatgcttattgcactt 276

                                                                       
Query: 181 tcgccattgttgaaagcactgactgctgataaacttatgaggcattcagatgagggtgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcgccattgttgaaagcactgactgctgataaacttatgaggcattcagatgagggtgta 336

                                                                       
Query: 241 agagtttctattgcctcttgcatcagtgaacttataagaataacggcccctgatcctcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agagtttctattgcctcttgcatcagtgaacttataagaataacggcccctgatcctcct 396

                                                                       
Query: 301 tatgaagatgaccaaatgaaggaggtgtttcatttgattgtatcagctgttgaaaatttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tatgaagatgaccaaatgaaggaggtgtttcatttgattgtatcagctgttgaaaatttg 456

                                                                       
Query: 361 catgatatgtcaagccgatcatatgcaaagaggatcaatattctctatttgcttgcgaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 catgatatgtcaagccgatcatatgcaaagaggatcaatattctctatttgcttgcgaaa 516

                                                                       
Query: 421 gtcaggtcatgtattttaatgctggatctcaattgtgatttgctgattttggagatgttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 517 gtcaggtcatgtattttaatgctggatctcaattgtgatttgctgatcttggagatgttt 576

                                                                       
Query: 481 cagcatttctttaaggaaattagggagtttctccaacagctagaaaattgggggagagag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 cagcatttctttaaggaaattagggagtttctccaacagctagaaaattgggggagagag 636

                 
Query: 541 tcctga 546
           ||||||
Sbjct: 637 tcctga 642


>gnl|LJGI|GO009929 similar to UniRef100_A7P5X1 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 793

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgcctcttgcatcagtgaacttataagaataacggcccctgatcctccttatgaagatg 310
           ||||||| |||||||||||  | | |||||| || || |||||| ||||||| || ||||
Sbjct: 6   ttgcctcgtgcatcagtgagatgacaagaatcactgcacctgatgctccttacgatgatg 65

                       
Query: 311 accaaatgaagg 322
           ||||||||||||
Sbjct: 66  accaaatgaagg 77



 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 413 ttgcgaaagtcaggtcatgtattttaatgctggatctcaattgtgatttgctgattttgg 472
           |||| ||||||||||||||| |  |||||||||||||  | ||||||   || ||||  |
Sbjct: 168 ttgcaaaagtcaggtcatgtgtggtaatgctggatcttgaatgtgatgccctaatttcag 227

                              
Query: 473 agatgtttcagcatttctt 491
           |||||||||||||||||||
Sbjct: 228 agatgtttcagcatttctt 246