Miyakogusa Predicted Gene

Lj2g3v2522110.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2522110.2 Non Chatacterized Hit- tr|G7KFV8|G7KFV8_MEDTR
AarF domain-containing protein kinase, putative
OS=Med,77.78,0,seg,NULL; ABC1,UbiB domain; ABC1 FAMILY PROTEIN
KINASE,NULL; CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC,CUFF.39037.2
         (1701 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024378 similar to UniRef100_A7PTR1 Cluster: Chromosom...   149   7e-35

>gnl|LJGI|GO024378 similar to UniRef100_A7PTR1 Cluster: Chromosome undetermined
           scaffold_30, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_30, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (6%)
          Length = 570

 Score =  149 bits (75), Expect = 7e-35
 Identities = 96/103 (93%)
 Strand = Plus / Minus

                                                                       
Query: 265 caggttcatctacgctctgctgagaggcttctcaggctctgcgaagccaacaaggggttt 324
           |||||||||||||||| ||||||||||||||| ||| | |||||||||||||| ||||||
Sbjct: 364 caggttcatctacgctgtgctgagaggcttctgaggttatgcgaagccaacaaagggttt 305

                                                      
Query: 325 tatgtgaaggctggacagttcgtcgctgcgcagaaagtgcttc 367
           ||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 304 tatgtgaaggctggacagttcgttgccgcgcagaaagtgcttc 262



 Score =  119 bits (60), Expect = 6e-26
 Identities = 81/88 (92%)
 Strand = Plus / Minus

                                                                       
Query: 183 ggtcgcttccaccgtcgtcgactacgaattctcgctccgcggccttcaacgccactccga 242
           ||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 561 ggtcgctgccaccgtcgttgactacggattctcgctgcgcggccttcaacgccactccga 502

                                       
Query: 243 tcagtatcgccatgcaatttcccaggtt 270
           |||||||||||| |  ||||||||||||
Sbjct: 501 tcagtatcgccaagagatttcccaggtt 474