Miyakogusa Predicted Gene
- Lj2g3v2510040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2510040.1 Non Chatacterized Hit- tr|I1JHS2|I1JHS2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22078 PE,81.89,0,no
description,Barwin-like endoglucanase; no description,Pollen
allergen/expansin, C-terminal; EXPAN,CUFF.39034.1
(810 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71552 similar to UniRef100_A7PTQ3 Cluster: Chromosome... 1572 0.0
gnl|LJGI|BP041103 similar to UniRef100_A7PTQ3 Cluster: Chromosom... 184 6e-46
gnl|LJGI|TC68615 similar to UniRef100_A4GWU6 Cluster: Expansin; ... 52 5e-06
>gnl|LJGI|TC71552 similar to UniRef100_A7PTQ3 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (90%)
Length = 1247
Score = 1572 bits (793), Expect = 0.0
Identities = 796/797 (99%)
Strand = Plus / Plus
Query: 1 atgtcacttcccactgcatcatttctcatcaccctcctcttcaccacagtcacctctcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgtcacttcccactgcatcatttctcatcaccctcctcttcaccacagtcacctctcac 137
Query: 61 tactccttctctacatctcccaacccaccacgatcttcctcttcctcttcctcctcatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tactccttctctacatctcccaacccaccacgatcttcctcttcctcttcctcctcatgg 197
Query: 121 tcctccctctccgaatggcgatctgcacgcgccacctactacgctgcagcggatccgcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tcctccctctccgaatggcgatctgcacgcgccacctactacgctgcagcggatccgcgt 257
Query: 181 gacgctgtaggcggcgcgtgcggctacggcgacctcttaaaaactggctacggcatggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gacgctgtaggcggcgcgtgcggctacggcgacctcttaaaaactggctacggcatggcc 317
Query: 241 acggcggggctgagtgagacgctgtttgaacgggggcagatctgcggcgcgtgttttgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acggcggggctgagtgagacgctgtttgaacgggggcagatctgcggcgcgtgttttgag 377
Query: 301 ctccggtgtgtggaggatagtcggtggtgtttacctgggacgagcatcattgtcaccgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctccggtgtgtggaggatagtcggtggtgtttacctgggacgagcatcattgtcaccgcc 437
Query: 361 acgaacttctgtgctccgaactatgggtttacggcggagggaggtgggcactgtaatcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 acgaacttctgtgctccgaactatgggtttacggcggagggaggtgggcactgtaatcct 497
Query: 421 ccgaataaccattttgttcttcccattgaagcttttgagaagatcgctatctggaaggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccgaataaccattttgttcttcccattgaagcttttgagaagatcgctatctggaaggct 557
Query: 481 gggaatatgcctcttcagtatcgcaggataaactgcagaagagaaggtggaatccgattt 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gggaatatgccgcttcagtatcgcaggataaactgcagaagagaaggtggaatccgattt 617
Query: 541 acagtcactggttctggtatcttcatttcagtgctaatcagcaatgttgctggacacgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 acagtcactggttctggtatcttcatttcagtgctaatcagcaatgttgctggacacgga 677
Query: 601 gacatagtagcggtgaaggttaagggttcaagaactggttggcttcaaatgggtcgcaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gacatagtagcggtgaaggttaagggttcaagaactggttggcttcaaatgggtcgcaat 737
Query: 661 tggggtcaaaactggcatataaatgcattattacagaatcaacctctttcatttgaggtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tggggtcaaaactggcatataaatgcattattacagaatcaacctctttcatttgaggtt 797
Query: 721 actggtagtgatgggaaaacagttacgtcttacaatgctgctcccaaggattggagtttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 actggtagtgatgggaaaacagttacgtcttacaatgctgctcccaaggattggagtttt 857
Query: 781 ggacaaacctttgaagg 797
|||||||||||||||||
Sbjct: 858 ggacaaacctttgaagg 874
>gnl|LJGI|BP041103 similar to UniRef100_A7PTQ3 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 531
Score = 184 bits (93), Expect = 6e-46
Identities = 240/289 (83%)
Strand = Plus / Minus
Query: 509 taaactgcagaagagaaggtggaatccgatttacagtcactggttctggtatcttcattt 568
|||| |||||||| ||||| || ||||| |||||| | | ||||| || ||||||||||
Sbjct: 527 taaaatgcagaagggaaggggggatccggtttacaattagcggttccggcatcttcattt 468
Query: 569 cagtgctaatcagcaatgttgctggacacggagacatagtagcggtgaaggttaagggtt 628
| ||| | ||||| |||| |||||| |||||||| || || |||||| |||||||
Sbjct: 467 cggtgttgatcagtaatgctgctggtatgggagacattgttgctgtgaagaccaagggtt 408
Query: 629 caagaactggttggcttcaaatgggtcgcaattggggtcaaaactggcatataaatgcat 688
|||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||| |
Sbjct: 407 caagaactggttggcttcccatgggtcgaaattggggccaaaactggcatctaaatgcgt 348
Query: 689 tattacagaatcaacctctttcatttgaggttactggtagtgatgggaaaacagttacgt 748
|| | || || || |||||||| |||||||||||| |||||||||| | |||| | || |
Sbjct: 347 tactgcaaaaccagcctctttcttttgaggttactagtagtgatggaataacactcacat 288
Query: 749 cttacaatgctgctcccaaggattggagttttggacaaacctttgaagg 797
|||||||| |||||||||| ||||||| ||||| ||||||||||||||
Sbjct: 287 gttacaatgttgctcccaagaattggagctttgggcaaacctttgaagg 239
>gnl|LJGI|TC68615 similar to UniRef100_A4GWU6 Cluster: Expansin; n=1; Litchi
chinensis|Rep: Expansin - Litchi chinensis (Lychee),
partial (95%)
Length = 1302
Score = 52.0 bits (26), Expect = 5e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 345 catcattgtcaccgccacgaacttctgtgctccgaact 382
|||||| ||||||||||| ||||||||| |||||||||
Sbjct: 376 catcatcgtcaccgccactaacttctgtcctccgaact 413