Miyakogusa Predicted Gene
- Lj2g3v2507950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2507950.1 Non Chatacterized Hit- tr|I3S087|I3S087_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99,0,RAB,NULL;
small_GTP: small GTP-binding protein domain,Small GTP-binding protein
domain; RASTRNSFRMNG,CUFF.39057.1
(603 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57678 homologue to UniRef100_Q41668 Cluster: Guanine ... 1195 0.0
gnl|LJGI|TC57193 UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus jap... 779 0.0
gnl|LJGI|GO031991 homologue to UniRef100_Q41668 Cluster: Guanine... 541 e-153
gnl|LJGI|TC74657 similar to UniRef100_Q41668 Cluster: Guanine nu... 351 3e-96
gnl|LJGI|DC597008 homologue to UniRef100_Q40209 Cluster: RAB5A; ... 278 4e-74
gnl|LJGI|AV419800 UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus ja... 234 5e-61
gnl|LJGI|TC80246 similar to UniRef100_A7PER1 Cluster: Chromosome... 64 1e-09
>gnl|LJGI|TC57678 homologue to UniRef100_Q41668 Cluster: Guanine nucleotide
regulatory protein; n=1; Vicia faba|Rep: Guanine
nucleotide regulatory protein - Vicia faba (Broad bean),
complete
Length = 1059
Score = 1195 bits (603), Expect = 0.0
Identities = 603/603 (100%)
Strand = Plus / Plus
Query: 1 atggctacggtcggacacaacaatctcaatgccaaattggttctcctcggggatatgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atggctacggtcggacacaacaatctcaatgccaaattggttctcctcggggatatgggt 207
Query: 61 actggaaaatccagcctcgttttgcgttttgtcaagggtcaattccttgaatttcaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 actggaaaatccagcctcgttttgcgttttgtcaagggtcaattccttgaatttcaggaa 267
Query: 121 tcaacaataggggcagcattcttttcacagacactggcagtaaatgatgccacagtgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tcaacaataggggcagcattcttttcacagacactggcagtaaatgatgccacagtgaaa 327
Query: 181 tttgagatttgggacacagcaggacaagagagataccatagcttggctcccatgtattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tttgagatttgggacacagcaggacaagagagataccatagcttggctcccatgtattac 387
Query: 241 agaggcgctgctgctgctatcattgtctatgacattactagctcagattcatttacaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agaggcgctgctgctgctatcattgtctatgacattactagctcagattcatttacaaga 447
Query: 301 gctaaaaagtgggtccaagagcttcagaagcaagggaatcctaatatggttgtggcccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gctaaaaagtgggtccaagagcttcagaagcaagggaatcctaatatggttgtggcccta 507
Query: 361 gctggtaacaaatctgacttggaagataagaggaaagtgacgcctgaagaagcacgcgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gctggtaacaaatctgacttggaagataagaggaaagtgacgcctgaagaagcacgcgta 567
Query: 421 tatgctgaagacaatggtctatttttcatggagacctctgcaaaaactgctgccaatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tatgctgaagacaatggtctatttttcatggagacctctgcaaaaactgctgccaatgtt 627
Query: 481 aatgatgtattttatgaaatagccaagaggttaccaagggcacagcctgcgcaaaaccca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aatgatgtattttatgaaatagccaagaggttaccaagggcacagcctgcgcaaaaccca 687
Query: 541 gcagggatggttcttgttgatagacctgcagaaggatccagagctgcatcatgttgttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gcagggatggttcttgttgatagacctgcagaaggatccagagctgcatcatgttgttca 747
Query: 601 tga 603
|||
Sbjct: 748 tga 750
>gnl|LJGI|TC57193 UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus japonicus|Rep: RAB5A -
Lotus japonicus, complete
Length = 1135
Score = 779 bits (393), Expect = 0.0
Identities = 549/601 (91%)
Strand = Plus / Plus
Query: 1 atggctacggtcggacacaacaatctcaatgccaaattggttctcctcggggatatgggt 60
||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 212 atggctacgatcgggcacaacaatctcaatgctaaattggttctcctcggggatatgggt 271
Query: 61 actggaaaatccagcctcgttttgcgttttgtcaagggtcaattccttgaatttcaggaa 120
|||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 272 gctggaaaatccagccttgttttgcgctttgtcaagggtcaatttctcgaatttcaggaa 331
Query: 121 tcaacaataggggcagcattcttttcacagacactggcagtaaatgatgccacagtgaaa 180
|||||||||||||| ||||||||||| ||||| |||||||||| ||||| || || |||
Sbjct: 332 tcaacaataggggcggcattcttttcgcagactttggcagtaaacgatgcaactgttaaa 391
Query: 181 tttgagatttgggacacagcaggacaagagagataccatagcttggctcccatgtattac 240
|||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 392 tttgagatttgggacacagcggggcaagagaggtaccatagcttggctcccatgtattac 451
Query: 241 agaggcgctgctgctgctatcattgtctatgacattactagctcagattcatttacaaga 300
||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| ||
Sbjct: 452 agaggcgctgctgctgctatcattgtctacgacatcactagctcagattcgtttacacga 511
Query: 301 gctaaaaagtgggtccaagagcttcagaagcaagggaatcctaatatggttgtggcccta 360
||||| |||||||||||||||||||| ||||||||||| ||||| ||||| |||| |
Sbjct: 512 gctaagaagtgggtccaagagcttcaaaagcaagggaaccctaacatggtcatggctttc 571
Query: 361 gctggtaacaaatctgacttggaagataagaggaaagtgacgcctgaagaagcacgcgta 420
|||||||||||||||||||||||||||||||| |||||||| |||| || ||||| ||
Sbjct: 572 gctggtaacaaatctgacttggaagataagagaaaagtgactgctgatgaggcacgtgtt 631
Query: 421 tatgctgaagacaatggtctatttttcatggagacctctgcaaaaactgctgccaatgtt 480
||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 632 tatgctgaagaaaatggtctgtttttcatggagacctctgccaaaactgcagccaatgtt 691
Query: 481 aatgatgtattttatgaaatagccaagaggttaccaagggcacagcctgcgcaaaaccca 540
||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 692 aatgatgtattttatgaaatagccaagaggttaccaagggctcagccagctcaaaaccca 751
Query: 541 gcagggatggttcttgttgatagacctgcagaaggatccagagctgcatcatgttgttca 600
|||||||||||||||||||||||||| || |||||| | || ||| ||||||||||||||
Sbjct: 752 gcagggatggttcttgttgatagacccgccgaaggagctagggcttcatcatgttgttca 811
Query: 601 t 601
|
Sbjct: 812 t 812
>gnl|LJGI|GO031991 homologue to UniRef100_Q41668 Cluster: Guanine nucleotide
regulatory protein; n=1; Vicia faba|Rep: Guanine
nucleotide regulatory protein - Vicia faba (Broad bean),
partial (62%)
Length = 632
Score = 541 bits (273), Expect = e-153
Identities = 273/273 (100%)
Strand = Plus / Plus
Query: 331 caagggaatcctaatatggttgtggccctagctggtaacaaatctgacttggaagataag 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 caagggaatcctaatatggttgtggccctagctggtaacaaatctgacttggaagataag 299
Query: 391 aggaaagtgacgcctgaagaagcacgcgtatatgctgaagacaatggtctatttttcatg 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aggaaagtgacgcctgaagaagcacgcgtatatgctgaagacaatggtctatttttcatg 359
Query: 451 gagacctctgcaaaaactgctgccaatgttaatgatgtattttatgaaatagccaagagg 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gagacctctgcaaaaactgctgccaatgttaatgatgtattttatgaaatagccaagagg 419
Query: 511 ttaccaagggcacagcctgcgcaaaacccagcagggatggttcttgttgatagacctgca 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttaccaagggcacagcctgcgcaaaacccagcagggatggttcttgttgatagacctgca 479
Query: 571 gaaggatccagagctgcatcatgttgttcatga 603
|||||||||||||||||||||||||||||||||
Sbjct: 480 gaaggatccagagctgcatcatgttgttcatga 512
Score = 194 bits (98), Expect = 4e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 atggctacggtcggacacaacaatctcaatgccaaattggttctcctcggggatatgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atggctacggtcggacacaacaatctcaatgccaaattggttctcctcggggatatgggt 207
Query: 61 actggaaaatccagcctcgttttgcgttttgtcaaggg 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 208 actggaaaatccagcctcgttttgcgttttgtcaaggg 245
>gnl|LJGI|TC74657 similar to UniRef100_Q41668 Cluster: Guanine nucleotide regulatory
protein; n=1; Vicia faba|Rep: Guanine nucleotide
regulatory protein - Vicia faba (Broad bean), partial
(32%)
Length = 597
Score = 351 bits (177), Expect = 3e-96
Identities = 195/201 (97%)
Strand = Plus / Plus
Query: 403 cctgaagaagcacgcgtatatgctgaagacaatggtctatttttcatggagacctctgca 462
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgaagaagcacgcgtatatgctgaagacaatggtctatttttcatggagacctctgcc 60
Query: 463 aaaactgctgccaatgttaatgatgtattttatgaaatagccaagaggttaccaagggca 522
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaactgctgcccatgttaatgatgtattttatgaaatagccaagaggttaccaagggca 120
Query: 523 cagcctgcgcaaaacccagcagggatggttcttgttgatagacctgcagaaggatccaga 582
|||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagcctgcgccatacccagccgggatggttcttgttgatagacctgcagaaggatccaga 180
Query: 583 gctgcatcatgttgttcatga 603
|||||||||||||||||||||
Sbjct: 181 gctgcatcatgttgttcatga 201
>gnl|LJGI|DC597008 homologue to UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus
japonicus|Rep: RAB5A - Lotus japonicus, partial (30%)
Length = 397
Score = 278 bits (140), Expect = 4e-74
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 39 ggttctcctcggggatatgggtactggaaaatccagcctcgttttgcgttttgtcaaggg 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggttctcctcggggatatgggtactggaaaatccagcctcgttttgcgttttgtcaaggg 317
Query: 99 tcaattccttgaatttcaggaatcaacaataggggcagcattcttttcacagacactggc 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcaattccttgaatttcaggaatcaacaataggggcagcattcttttcacagacactggc 377
Query: 159 agtaaatgatgccacagtga 178
||||||||||||||||||||
Sbjct: 378 agtaaatgatgccacagtga 397
Score = 81.8 bits (41), Expect = 5e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 atggctacggtcggacacaacaatctcaatgccaaattggt 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atggctacggtcggacacaacaatctcaatgccaaattggt 165
>gnl|LJGI|AV419800 UniRef100_Q40209 Cluster: RAB5A; n=1; Lotus japonicus|Rep: RAB5A -
Lotus japonicus, partial (28%)
Length = 426
Score = 234 bits (118), Expect = 5e-61
Identities = 157/170 (92%)
Strand = Plus / Plus
Query: 1 atggctacggtcggacacaacaatctcaatgccaaattggttctcctcggggatatgggt 60
||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 254 atggctacgatcgggcacaacaatctcaatgctaaattggttctcctcggggatatgggt 313
Query: 61 actggaaaatccagcctcgttttgcgttttgtcaagggtcaattccttgaatttcaggaa 120
|||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||
Sbjct: 314 gctggaaaatccagccttgttttgcgctttgtcaagggtcaatttctcgaatttcaggaa 373
Query: 121 tcaacaataggggcagcattcttttcacagacactggcagtaaatgatgc 170
|||||||||||||| ||||||||||| ||||| |||||||||| |||||
Sbjct: 374 tcaacaataggggcggcattcttttcgcagactttggcagtaaacgatgc 423
>gnl|LJGI|TC80246 similar to UniRef100_A7PER1 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (92%)
Length = 1028
Score = 63.9 bits (32), Expect = 1e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 163 aatgatgccacagtgaaatttgagatttgggacacagcaggacaagagagataccatagc 222
||||| ||||| ||||| ||||| || |||||||| ||||| ||||| ||||||| |
Sbjct: 229 aatgaagccacggtgaagtttgatatatgggacactgcagggcaagaacgataccactgt 288
Query: 223 ttggctcccatgtattacagaggcgctgctgctgctatcattgtctatgacattac 278
|||||||| ||||| || | || |||||| ||||||| ||||||||||||||||
Sbjct: 289 ttggctcctatgtactatcgtggtgctgcttctgctatagttgtctatgacattac 344