Miyakogusa Predicted Gene
- Lj2g3v2506760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2506760.1 Non Chatacterized Hit- tr|B9HT98|B9HT98_POPTR
Putative uncharacterized protein (Fragment)
OS=Populus,44.44,3e-18,FAMILY NOT NAMED,NULL; seg,NULL;
coiled-coil,NULL,gene.g43427.t1.1
(2094 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70176 similar to UniRef100_A7PLR8 Cluster: Chromosome... 1055 0.0
gnl|LJGI|FS359895 similar to UniRef100_A7QBP4 Cluster: Chromosom... 58 2e-07
>gnl|LJGI|TC70176 similar to UniRef100_A7PLR8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 992
Score = 1055 bits (532), Expect = 0.0
Identities = 532/532 (100%)
Strand = Plus / Plus
Query: 1 atgtctgtcaaaaattcagatgctgttgtgttccaaaggaattgtttggagttcaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atgtctgtcaaaaattcagatgctgttgtgttccaaaggaattgtttggagttcaacttg 520
Query: 61 tatgagcccagaagagataagattgttaaaggccagttgctggcgacggccatcgtagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tatgagcccagaagagataagattgttaaaggccagttgctggcgacggccatcgtagac 580
Query: 121 ttggcagattgtggcatactcagagagactttgagcattagtgcaccattgaactgcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttggcagattgtggcatactcagagagactttgagcattagtgcaccattgaactgcaag 640
Query: 181 aggagctacagaaacactgatcagtcttttttgttcattaaaatcgagccggttgaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aggagctacagaaacactgatcagtcttttttgttcattaaaatcgagccggttgaaaag 700
Query: 241 aatcgagctaggccctcgttgaaggacagattgtcaaaggacaataatggcagtgattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aatcgagctaggccctcgttgaaggacagattgtcaaaggacaataatggcagtgattct 760
Query: 301 gtatcagcattgatgaatggagaatatgctgaggaagctgagattgcctcctttactgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gtatcagcattgatgaatggagaatatgctgaggaagctgagattgcctcctttactgat 820
Query: 361 gatgatgtttcctctcattcatctttagcagcaattactacttcccctgaatctagtggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gatgatgtttcctctcattcatctttagcagcaattactacttcccctgaatctagtggg 880
Query: 421 tgtatgcctcgtgaacatgaagagaatataccagcgcgaaacactcgtaggaatgacatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 tgtatgcctcgtgaacatgaagagaatataccagcgcgaaacactcgtaggaatgacatg 940
Query: 481 gagcttcccttggcttcagaatcaagggttgaaaagatgaatatgatgcaac 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 gagcttcccttggcttcagaatcaagggttgaaaagatgaatatgatgcaac 992
>gnl|LJGI|FS359895 similar to UniRef100_A7QBP4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 719
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 1579 aaagcatgtggaaatgatgtcccaaggttaacattttggtt 1619
|||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 140 aaagcatgtggaaatgatgttccaaggttgacattctggtt 100