Miyakogusa Predicted Gene

Lj2g3v2485560.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2485560.1 Non Chatacterized Hit- tr|F6HG18|F6HG18_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.41,0.00000000000003,AAA_12,NULL; P-loop containing nucleoside
triphosphate hydrolases,NULL; SUBFAMILY NOT NAMED,NULL;
DN,CUFF.38998.1
         (483 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76384 weakly similar to UniRef100_A7QTT0 Cluster: Chr...   123   1e-27

>gnl|LJGI|TC76384 weakly similar to UniRef100_A7QTT0 Cluster: Chromosome undetermined
           scaffold_171, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_171,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (28%)
          Length = 1457

 Score =  123 bits (62), Expect = 1e-27
 Identities = 155/186 (83%)
 Strand = Plus / Plus

                                                                       
Query: 295 atatctccgtataaggctcaagtttttgaaatccaagagagagttaagcagcacgtttcg 354
           |||||||| |||||  ||||||||| |||||||||| ||| | ||||||| ||| |||| 
Sbjct: 773 atatctccctataattctcaagtttatgaaatccaacagaaaattaagcaccacatttca 832

                                                                       
Query: 355 gtttatgatacctacttctctgttagtgttcgttctgttgatggctttcaaggtggcgaa 414
           |||| |||| |  |||||||||| ||||||||||| |||||||| ||| |||| || |||
Sbjct: 833 gtttctgatcctgacttctctgtcagtgttcgttcggttgatggatttaaaggaggggaa 892

                                                                       
Query: 415 gaagatttaattataatttccactgtgagatctaatcggaatggaaatgtgggttttctt 474
            | ||| | || |||||||| ||||||||||||||||  | |||||| ||||| ||||||
Sbjct: 893 caggatgttataataatttctactgtgagatctaatcctagtggaaaagtggggtttctt 952

                 
Query: 475 tccaat 480
           ||||||
Sbjct: 953 tccaat 958