Miyakogusa Predicted Gene
- Lj2g3v2471460.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2471460.2 Non Chatacterized Hit- tr|C4J6A7|C4J6A7_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,44.74,3e-18,NIBRIN-RELATED,NULL; FHA_DOMAIN,Forkhead-associated
(FHA) domain; SMAD/FHA domain,SMAD/FHA domain; n,CUFF.38990.2
(1665 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS319923 weakly similar to UniRef100_A7PTL3 Cluster: Ch... 1479 0.0
gnl|LJGI|TC66610 similar to UniRef100_A1YEB0 Cluster: NBS1; n=1;... 1346 0.0
>gnl|LJGI|FS319923 weakly similar to UniRef100_A7PTL3 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (69%)
Length = 793
Score = 1479 bits (746), Expect = 0.0
Identities = 760/767 (99%)
Strand = Plus / Plus
Query: 1 atggtgtggggactcttccctatcgatcctctttcaggtgaagataagtactacattttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 atggtgtggggactcttccctatcgatcctctttcaggtgaagataagtactacattttc 86
Query: 61 aaaactggggtttacaaagttggtcgaaaaggttgtgatgtgatcgtcactaaagataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 aaaactggggtttacaaagttggtcgaaaaggttgtgatgtgatcgtcactaaagataaa 146
Query: 121 ggagtttctcgagttcatgcagaaatagttgttaatgcaatgaacatgtctaatctttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ggagtttctcgagttcatgcagaaatagttgttaatgcaatgaacatgtctaatctttca 206
Query: 181 gcctgtgtacaaattagagattgctccaagtatggtacgtttattaccaagagcgatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gcctgtgtacaaattagagattgctccaagtatggtacgtttattaccaagagcgatggg 266
Query: 241 ctcaagaaaaaagttcatgagctaccaaataaagaaacagaattacaggatggtgacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctcaagaaaaaagttcatgagctaccaaataaagaaacagaattacaggatggtgacctt 326
Query: 301 gtttcttttggcactggcagtgccacctacaagttttgccatgtccccctcaatattttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtttcttttggcactggcagtgccacctacaagttttgccatgtccccctcaatattttc 386
Query: 361 atatgctcatcgaataaagtggatcgatctcttaaagagaaaatttcatcaattggtgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atatgctcatcgaataaagtggatcgatctcttaaagagaaaatttcatcaattggtgct 446
Query: 421 agtattactcataccttaggtgaagattgcacatatgtgctggtagatcaactcatgcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agtattactcataccttaggtgaagattgcacatatgtgctggtagatcaactcatgcct 506
Query: 481 ctgaagaaggaccttgttgatgctgttgtggcnnnnnnntcttgcgttctcaaaacttgg 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 507 ctgaagaaggaccttgttgatgctgttgtggcaaaaaaatcttgcgttctcaaaacttgg 566
Query: 541 cttgaggtttttgcagagaaaaacattagcactgaaattcctagctgtcacacatatttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cttgaggtttttgcagagaaaaacattagcactgaaattcctagctgtcacacatatttt 626
Query: 601 ccaacagtgtcagtggaaggagcatctatcaatgttgctgaccccaaaagccgtgaaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ccaacagtgtcagtggaaggagcatctatcaatgttgctgaccccaaaagccgtgaaaac 686
Query: 661 tgcttgaaaggatatacttttgtgttgggatctgtgcatttgtacaaatttggggatcag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tgcttgaaaggatatacttttgtgttgggatctgtgcatttgtacaaatttggggatcag 746
Query: 721 ctaaagtctttattgcaagtggctggtgctaaagttatttctcttga 767
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ctaaagtctttattgcaagtggctggtgctaaagttatttctcttga 793
>gnl|LJGI|TC66610 similar to UniRef100_A1YEB0 Cluster: NBS1; n=1; Arabidopsis
thaliana|Rep: NBS1 - Arabidopsis thaliana (Mouse-ear
cress), partial (14%)
Length = 891
Score = 1346 bits (679), Expect = 0.0
Identities = 679/679 (100%)
Strand = Plus / Plus
Query: 987 agatgacacagatgagacagttgttgcagattcagacacagaagttgaaacagcaacatc 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatgacacagatgagacagttgttgcagattcagacacagaagttgaaacagcaacatc 60
Query: 1047 agcccacgccagtgaggcactatgtgaaggcaataatgtaaaaacaaaagaatcagattc 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcccacgccagtgaggcactatgtgaaggcaataatgtaaaaacaaaagaatcagattc 120
Query: 1107 aggtgatgattcccgcactctggataagagaaaacatgagagaatggaggcatctgtgga 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggtgatgattcccgcactctggataagagaaaacatgagagaatggaggcatctgtgga 180
Query: 1167 tgatgtttctaccagattgcatgaaataaaacatgcaaaagcagaaacagtcttggatgg 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatgtttctaccagattgcatgaaataaaacatgcaaaagcagaaacagtcttggatgg 240
Query: 1227 tgtttctgtcaaatcagatacgcatgctaccagcttcaaggatggtagtggtggtattaa 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtttctgtcaaatcagatacgcatgctaccagcttcaaggatggtagtggtggtattaa 300
Query: 1287 aataaagaaagacaagattgatgattatgaaaatggatattcagttattgtttacagcca 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aataaagaaagacaagattgatgattatgaaaatggatattcagttattgtttacagcca 360
Query: 1347 agatttagttgttcgagatataaacatacttactaacacaagtactgcaccaaacagcag 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agatttagttgttcgagatataaacatacttactaacacaagtactgcaccaaacagcag 420
Query: 1407 cgttccaaattttaaacgctttagaaagggacaaactcaatctggtaatagtttcgacaa 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgttccaaattttaaacgctttagaaagggacaaactcaatctggtaatagtttcgacaa 480
Query: 1467 tcttgttccatttgcaaaatatccatacaaggattctggctctgggaatgatgagatggt 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcttgttccatttgcaaaatatccatacaaggattctggctctgggaatgatgagatggt 540
Query: 1527 tgagtatgtgaaagaggagaagaggcgaaagcaaacagaagctatggcagatgacctatt 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgagtatgtgaaagaggagaagaggcgaaagcaaacagaagctatggcagatgacctatt 600
Query: 1587 taataatgagaaggcaaggaaacgaggcacaactggacgaggcacagctggttctcttca 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taataatgagaaggcaaggaaacgaggcacaactggacgaggcacagctggttctcttca 660
Query: 1647 gggcattcttatttcatga 1665
|||||||||||||||||||
Sbjct: 661 gggcattcttatttcatga 679