Miyakogusa Predicted Gene
- Lj2g3v2459310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2459310.1 Non Chatacterized Hit- tr|D7LZX4|D7LZX4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,45.19,4e-17,seg,NULL,CUFF.38989.1
(2199 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75534 similar to UniRef100_A7PTK9 Cluster: Chromosome... 1641 0.0
gnl|LJGI|TC61582 similar to UniRef100_A7PTK9 Cluster: Chromosome... 1253 0.0
gnl|LJGI|BP039128 103 5e-21
gnl|LJGI|FS321110 homologue to UniRef100_A7PTK9 Cluster: Chromos... 98 3e-19
gnl|LJGI|GO018759 homologue to UniRef100_A7PTK9 Cluster: Chromos... 98 3e-19
gnl|LJGI|TC65418 similar to UniRef100_A7PTK9 Cluster: Chromosome... 68 3e-10
>gnl|LJGI|TC75534 similar to UniRef100_A7PTK9 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(25%)
Length = 1277
Score = 1641 bits (828), Expect = 0.0
Identities = 834/836 (99%)
Strand = Plus / Plus
Query: 1364 gtggaaattgcaaggcgaaggagcaccaccaagaggaagagatcaaggtactgcctgata 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtggaaattgcaaggcgaaggagcaccaccaagaggaagagatcaaggtactgcctgata 241
Query: 1424 atgctgttgtgaagacagtgattgtgccatcaggggttgacaaccataaacctcagacat 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atgctgttgtgaagacagtgattgtgccatcaggggttgacaaccataaacctcagacat 301
Query: 1484 taacaagaagtagatcttctaggagatcatcaagagacttggacatcaatcctgaagctc 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 taacaagaagtagatcttctaggagatcatcaagagacttggacatcaatcctgaagctc 361
Query: 1544 tactgaatcctccactgacctacacctccctactccttgaagacatccataacttccatc 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tactgaatcctccactgacctacacctccctactccttgaagacatccataacttccatc 421
Query: 1604 aaaagaacacacagcaacaaccttctgtttctctcccagcttgtctcaccaaagcctgct 1663
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 422 aaaagaacacacagcaacgaccttctgtttctctcccagcttgtctcaccaaagcctact 481
Query: 1664 ccatccttgaagctgttgctgatctcaactctgccaccagctccaatttctctagtgcta 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccatccttgaagctgttgctgatctcaactctgccaccagctccaatttctctagtgcta 541
Query: 1724 atcatcaagggaagagagtggcagatactaaggacccttttgtagaatctgaggtagttg 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atcatcaagggaagagagtggcagatactaaggacccttttgtagaatctgaggtagttg 601
Query: 1784 tgagtgatgatgtgatggaaccaagcttgcacaagtatgtgacagtgaagaggggtggct 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgagtgatgatgtgatggaaccaagcttgcacaagtatgtgacagtgaagaggggtggct 661
Query: 1844 caatagacatggacgaccaagagtcttcaggaagcaacagtttcagtgttagcagtgctc 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caatagacatggacgaccaagagtcttcaggaagcaacagtttcagtgttagcagtgctc 721
Query: 1904 aacagcactggggggtttcctcttcttcatgggaacccagttctgcagactcaacagatt 1963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aacagcactggggggtttcctcttcttcatgggaacccagttctgcagactcaacagatt 781
Query: 1964 gctggacctcaagattgaacaactccagagatgagtgtcagaaatgtcccttaggcttgg 2023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gctggacctcaagattgaacaactccagagatgagtgtcagaaatgtcccttaggcttgg 841
Query: 2024 gtggtagtttgttgtcatctgatatggttgaagcaaggaagaagaagacattgaacagcg 2083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gtggtagtttgttgtcatctgatatggttgaagcaaggaagaagaagacattgaacagcg 901
Query: 2084 aaaggagagactgtgatcatcagcatagcggtgggatagggcgtggaaggcttggttcca 2143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 aaaggagagactgtgatcatcagcatagcggtgggatagggcgtggaaggcttggttcca 961
Query: 2144 ataagggtcttcacaacactttacctgtggtcacagctgctgcatcaacatagtgc 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ataagggtcttcacaacactttacctgtggtcacagctgctgcatcaacatagtgc 1017
Score = 77.8 bits (39), Expect = 3e-13
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 1 atgggtgcatgtttgagcaagaagaaagggtctagtgga 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atgggtgcatgtttgagcaagaagaaagggtctagtgga 186
>gnl|LJGI|TC61582 similar to UniRef100_A7PTK9 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 877
Score = 1253 bits (632), Expect = 0.0
Identities = 632/632 (100%)
Strand = Plus / Plus
Query: 1 atgggtgcatgtttgagcaagaagaaagggtctagtggatctaattcaatttccacagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atgggtgcatgtttgagcaagaagaaagggtctagtggatctaattcaatttccacagca 305
Query: 61 ccccctcagccaaagaattcagagaatgttgtcactgtcaccatgtccaaaccagaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ccccctcagccaaagaattcagagaatgttgtcactgtcaccatgtccaaaccagaagtg 365
Query: 121 gtgtcccccaagaacaagaaactagacacagaaattgcaaaagaagatgaagggcaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gtgtcccccaagaacaagaaactagacacagaaattgcaaaagaagatgaagggcaagtg 425
Query: 181 aaaaaggagattttcatcatcaaacacaggaagagccatgatgagagggaaagaaactgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aaaaaggagattttcatcatcaaacacaggaagagccatgatgagagggaaagaaactgc 485
Query: 241 aagattccaccttacagccctcagaagaatctgcaagcaaaatcaggagatgggttgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aagattccaccttacagccctcagaagaatctgcaagcaaaatcaggagatgggttgtct 545
Query: 301 tcatcagaagctgaatcaatggggaagaacaaggttgcaattgcagttgcaaatgcaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcatcagaagctgaatcaatggggaagaacaaggttgcaattgcagttgcaaatgcaatt 605
Query: 361 gcaccatccacaccaaacatggctgtgactggtgtgaggacttcaagctgcaccaaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gcaccatccacaccaaacatggctgtgactggtgtgaggacttcaagctgcaccaaggaa 665
Query: 421 gaggttgatgcaattctcattcagtgtgggaggttgagtagaagctcttctggtagagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gaggttgatgcaattctcattcagtgtgggaggttgagtagaagctcttctggtagagct 725
Query: 481 gcttcttcttctggtgggagaaagtactctggttctaagaggagttttgattttgatcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gcttcttcttctggtgggagaaagtactctggttctaagaggagttttgattttgatcac 785
Query: 541 tgtgacaatgatgcagtttctgctgaagatgagactaagagagccaatggaagtgacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tgtgacaatgatgcagtttctgctgaagatgagactaagagagccaatggaagtgacaat 845
Query: 601 agtgaggagtatgatgctgctgctgaagggaa 632
||||||||||||||||||||||||||||||||
Sbjct: 846 agtgaggagtatgatgctgctgctgaagggaa 877
>gnl|LJGI|BP039128
Length = 419
Score = 103 bits (52), Expect = 5e-21
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 2144 ataagggtcttcacaacactttacctgtggtcacagctgctgcatcaacatagtgc 2199
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ataaggctcttcacaacactttacctgtggtcacagctgctgcatcaacatagtgc 215
>gnl|LJGI|FS321110 homologue to UniRef100_A7PTK9 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (8%)
Length = 750
Score = 97.6 bits (49), Expect = 3e-19
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 160 aaagaagatgaagggcaagtgaaaaaggagattttcatcatcaaacacaggaagagccat 219
||||||| | ||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 288 aaagaagttaaagggcatgtgaaaaaggagatattcatcatcaaacacaggaagagccat 347
Query: 220 gatga 224
|||||
Sbjct: 348 gatga 352
Score = 87.7 bits (44), Expect = 3e-16
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 393 tgtgaggacttcaagctgcaccaaggaagaggttgatgcaattctcattcagtgtgggag 452
|||||||||||||||||||||||| |||||||| ||||||||||| || |||||||||||
Sbjct: 461 tgtgaggacttcaagctgcaccaaagaagaggtggatgcaattcttatacagtgtgggag 520
>gnl|LJGI|GO018759 homologue to UniRef100_A7PTK9 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 704
Score = 97.6 bits (49), Expect = 3e-19
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 160 aaagaagatgaagggcaagtgaaaaaggagattttcatcatcaaacacaggaagagccat 219
||||||| | ||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 216 aaagaagttaaagggcatgtgaaaaaggagatattcatcatcaaacacaggaagagccat 275
Query: 220 gatga 224
|||||
Sbjct: 276 gatga 280
Score = 73.8 bits (37), Expect = 4e-12
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 748 agcagcagagagaggagagtgagtagatctcctgggagaagaacatctgagaccacaaca 807
|||||||||||||| ||||| |||||||| ||||| |||||| |||| |||||||| |||
Sbjct: 375 agcagcagagagagaagagttagtagatcccctggaagaagatcatcagagaccactaca 434
Query: 808 tctactgccaatgcaag 824
|| ||||||||||||
Sbjct: 435 cctgttgccaatgcaag 451
Score = 71.9 bits (36), Expect = 2e-11
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 848 ctaggcctgggaaattggtgtctgttcctgctactgtttcatcactggttatggagaaga 907
|||||||||| || |||| ||||||||||||||||||||||| || || ||||| ||||
Sbjct: 478 ctaggcctggaaagatggtttctgttcctgctactgtttcatcccttgtgatggataaga 537
Query: 908 gcaacaatggtagtgg 923
| ||||||||| ||||
Sbjct: 538 gtaacaatggtggtgg 553
Score = 56.0 bits (28), Expect = 1e-06
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1035 acgttctcagtctcctgctagagcaaatggaattgcagcaaatg 1078
|||||||||||| ||||| ||||||||||| | |||||||||||
Sbjct: 620 acgttctcagtcccctgcaagagcaaatgggaatgcagcaaatg 663
>gnl|LJGI|TC65418 similar to UniRef100_A7PTK9 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(10%)
Length = 721
Score = 67.9 bits (34), Expect = 3e-10
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1847 tagacatggacgaccaagagtcttcaggaagcaacagtttca 1888
|||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 261 tagacatggaggaccaagagtcttcaggaagcaacagcttca 302
Score = 65.9 bits (33), Expect = 1e-09
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 1919 tttcctcttcttcatgggaacccagttctgcagactcaacagattgctggacctcaagat 1978
|||| ||||||||||||||||| ||||||| || |||| | || || || |||||||
Sbjct: 330 tttcttcttcttcatgggaacctagttctggtgattcaaaatatctttgcacttcaagat 389
Query: 1979 tgaacaactccagagatgagtgtcagaaatgtcccttaggcttgg 2023
|||||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 390 tgaacaactccagagagcagggtcagaaacttccattaggcttgg 434
Score = 54.0 bits (27), Expect = 4e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1664 ccatccttgaagctgttgctgatctcaactc 1694
||||||||||||||||||||||||| |||||
Sbjct: 15 ccatccttgaagctgttgctgatcttaactc 45