Miyakogusa Predicted Gene

Lj2g3v2449260.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2449260.3 Non Chatacterized Hit- tr|A9PF63|A9PF63_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,47.3,1e-16,seg,NULL; B3 DNA binding domain,B3 DNA binding
domain; DNA-binding pseudobarrel domain,DNA-binding p,CUFF.38981.3
         (969 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS349663 weakly similar to UniRef100_A7TEY0 Cluster: Au...   831   0.0  
gnl|LJGI|TC61067 similar to UniRef100_A7NXZ1 Cluster: Chromosome...   605   e-172

>gnl|LJGI|FS349663 weakly similar to UniRef100_A7TEY0 Cluster: Autophagy-related
           protein 7; n=1; Vanderwaltozyma polyspora DSM 70294|Rep:
           Autophagy-related protein 7 - Vanderwaltozyma polyspora
           (strain ATCC 22028 / DSM 70294)(Kluyveromyces
           polysporus), partial (3%)
          Length = 643

 Score =  831 bits (419), Expect = 0.0
 Identities = 419/419 (100%)
 Strand = Plus / Minus

                                                                       
Query: 551 acaaggtaaagaagccaaaacaggccatcatgcacgaaactaatgaatcagagaattctc 610
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 acaaggtaaagaagccaaaacaggccatcatgcacgaaactaatgaatcagagaattctc 584

                                                                       
Query: 611 aggattctctgctagaaagtagcattgacaatgaagtcaaaccagctaagaaaactaaat 670
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aggattctctgctagaaagtagcattgacaatgaagtcaaaccagctaagaaaactaaat 524

                                                                       
Query: 671 cttctcagaaagaaatgaaaaagaaatatacactgcctgttactggtgaatcaaaagggg 730
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cttctcagaaagaaatgaaaaagaaatatacactgcctgttactggtgaatcaaaagggg 464

                                                                       
Query: 731 aagcaccaattgaaactatgaaaccaaaggaagctgttctttaccagcaaagtgaacttg 790
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aagcaccaattgaaactatgaaaccaaaggaagctgttctttaccagcaaagtgaacttg 404

                                                                       
Query: 791 gtgactcaggtaaggctgaacagcttcttttggaaaatgaagttgtcaaacctaacccgt 850
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gtgactcaggtaaggctgaacagcttcttttggaaaatgaagttgtcaaacctaacccgt 344

                                                                       
Query: 851 gcaagaagaaagaacttcaggatgctgagaacgagttaaagaaggttgagccaattgaac 910
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gcaagaagaaagaacttcaggatgctgagaacgagttaaagaaggttgagccaattgaac 284

                                                                      
Query: 911 aagcaagtaaaaggcctaggaaacaacgagctgtgaagcttttcagaaagaaagtatag 969
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aagcaagtaaaaggcctaggaaacaacgagctgtgaagcttttcagaaagaaagtatag 225


>gnl|LJGI|TC61067 similar to UniRef100_A7NXZ1 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (55%)
          Length = 821

 Score =  605 bits (305), Expect = e-172
 Identities = 305/305 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatttacagacttcctatccatcattcgtcaaatcaatggttcgatctcatgtttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atgaatttacagacttcctatccatcattcgtcaaatcaatggttcgatctcatgtttat 576

                                                                       
Query: 61  agctgcttttggttgggtcttccatctagattttgtgaggagcatctcccaaaaactctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 agctgcttttggttgggtcttccatctagattttgtgaggagcatctcccaaaaactctg 636

                                                                       
Query: 121 tatgacatgattttagaggatgaagatggttcagaatatgaggctgtttacattgggaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tatgacatgattttagaggatgaagatggttcagaatatgaggctgtttacattgggaaa 696

                                                                       
Query: 181 agaagtgggcttagcggaggctggagagcatttgcattggatcataagctggatgatggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 agaagtgggcttagcggaggctggagagcatttgcattggatcataagctggatgatggt 756

                                                                       
Query: 241 gatgcacttgtttttgaactggttgaggcctcgagatttaagatttatatttgtagagca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gatgcacttgtttttgaactggttgaggcctcgagatttaagatttatatttgtagagca 816

                
Query: 301 tttcc 305
           |||||
Sbjct: 817 tttcc 821