Miyakogusa Predicted Gene
- Lj2g3v2448200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2448200.1 Non Chatacterized Hit- tr|I1MZN4|I1MZN4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20583 PE,82.89,0,60S
RIBOSOMAL PROTEIN L10,NULL; Ribosomal protein L16p/L10e,Ribosomal
protein L10e/L16; RIBOSOMAL_L1,CUFF.38976.1
(780 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70360 homologue to UniRef100_Q3SC85 Cluster: 60S ribo... 1354 0.0
gnl|LJGI|BW610857 homologue to UniRef100_A7NXZ2 Cluster: Chromos... 729 0.0
gnl|LJGI|TC68936 homologue to UniRef100_Q9SPB3 Cluster: 60S ribo... 137 1e-31
gnl|LJGI|TC57361 homologue to UniRef100_Q9SPB3 Cluster: 60S ribo... 137 1e-31
gnl|LJGI|TC66979 homologue to UniRef100_A7NXZ2 Cluster: Chromoso... 88 1e-16
gnl|LJGI|TC82008 similar to UniRef100_A1CSY1 Cluster: 60S riboso... 52 5e-06
>gnl|LJGI|TC70360 homologue to UniRef100_Q3SC85 Cluster: 60S ribosomal protein L10;
n=1; Solanum lycopersicum|Rep: 60S ribosomal protein L10
- Solanum lycopersicum (Tomato) (Lycopersicon
esculentum), complete
Length = 890
Score = 1354 bits (683), Expect = 0.0
Identities = 686/687 (99%)
Strand = Plus / Plus
Query: 94 ccattttcaacaaccacaaccgccctgggaagaagaccggcgaggtgttaccggcagata 153
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ccattttcaacaaccacaaccgccatgggaagaagaccggcgaggtgttaccggcagata 60
Query: 154 aagaacaaaccatacccgaaatcccgcttctgccgcggcgtcccggacccaaagatccga 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagaacaaaccatacccgaaatcccgcttctgccgcggcgtcccggacccaaagatccga 120
Query: 214 atctacgacgtcgggatgaagaagaaaggcgtagacgagttccccttctgcgtccacctc 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctacgacgtcgggatgaagaagaaaggcgtagacgagttccccttctgcgtccacctc 180
Query: 274 gtctcatgggagaaggagaatgtctccagtgaagcactcgaggcggcgcggattgcctgc 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtctcatgggagaaggagaatgtctccagtgaagcactcgaggcggcgcggattgcctgc 240
Query: 334 aacaagtacatggccaagttcgccggaaaagacgcgttccacctccgcgtgagggtgcat 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacaagtacatggccaagttcgccggaaaagacgcgttccacctccgcgtgagggtgcat 300
Query: 394 cccttccacgtgctccgcatcaacaagatgctatcgtgcgcaggtgctgacaggttgcag 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cccttccacgtgctccgcatcaacaagatgctatcgtgcgcaggtgctgacaggttgcag 360
Query: 454 actgggatgagaggcgcgtttgggaaaccgcaggggacttgtgcgagggttagtattggg 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actgggatgagaggcgcgtttgggaaaccgcaggggacttgtgcgagggttagtattggg 420
Query: 514 caggtgctgctttcagtgaggtgtaaggatgggaatgcggttcatgctcaggaggcgctg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caggtgctgctttcagtgaggtgtaaggatgggaatgcggttcatgctcaggaggcgctg 480
Query: 574 cgtcgcgccaagttcaagtttcctggtcgccagaaaattattgttagcagaaagtgggga 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgtcgcgccaagttcaagtttcctggtcgccagaaaattattgttagcagaaagtgggga 540
Query: 634 tttactaagttgagcagaagtgattacttgaggttgaagtctgagaacagaattgtggct 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttactaagttgagcagaagtgattacttgaggttgaagtctgagaacagaattgtggct 600
Query: 694 gatggggtcaattgcaaggttcttgggtgccatggacctttggcgaatcgggcgcccgga 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatggggtcaattgcaaggttcttgggtgccatggacctttggcgaatcgggcgcccgga 660
Query: 754 agagctttcttgcaagctgcggcttag 780
|||||||||||||||||||||||||||
Sbjct: 661 agagctttcttgcaagctgcggcttag 687
>gnl|LJGI|BW610857 homologue to UniRef100_A7NXZ2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 487
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Plus
Query: 128 gaccggcgaggtgttaccggcagataaagaacaaaccatacccgaaatcccgcttctgcc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gaccggcgaggtgttaccggcagataaagaacaaaccatacccgaaatcccgcttctgcc 179
Query: 188 gcggcgtcccggacccaaagatccgaatctacgacgtcgggatgaagaagaaaggcgtag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gcggcgtcccggacccaaagatccgaatctacgacgtcgggatgaagaagaaaggcgtag 239
Query: 248 acgagttccccttctgcgtccacctcgtctcatgggagaaggagaatgtctccagtgaag 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acgagttccccttctgcgtccacctcgtctcatgggagaaggagaatgtctccagtgaag 299
Query: 308 cactcgaggcggcgcggattgcctgcaacaagtacatggccaagttcgccggaaaagacg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cactcgaggcggcgcggattgcctgcaacaagtacatggccaagttcgccggaaaagacg 359
Query: 368 cgttccacctccgcgtgagggtgcatcccttccacgtgctccgcatcaacaagatgctat 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cgttccacctccgcgtgagggtgcatcccttccacgtgctccgcatcaacaagatgctat 419
Query: 428 cgtgcgcaggtgctgacaggttgcagactgggatgagaggcgcgtttgggaaaccgcagg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cgtgcgcaggtgctgacaggttgcagactgggatgagaggcgcgtttgggaaaccgcagg 479
Query: 488 ggacttgt 495
||||||||
Sbjct: 480 ggacttgt 487
Score = 67.9 bits (34), Expect = 9e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 91 atcccattttcaacaaccacaaccgccctgggaagaag 128
||||||||||||||||||||||||||| ||||||||||
Sbjct: 12 atcccattttcaacaaccacaaccgccatgggaagaag 49
>gnl|LJGI|TC68936 homologue to UniRef100_Q9SPB3 Cluster: 60S ribosomal protein L10;
n=1; Vitis riparia|Rep: 60S ribosomal protein L10 -
Vitis riparia (Frost grape) (Vitis vulpina), complete
Length = 1105
Score = 137 bits (69), Expect = 1e-31
Identities = 291/365 (79%)
Strand = Plus / Plus
Query: 280 tgggagaaggagaatgtctccagtgaagcactcgaggcggcgcggattgcctgcaacaag 339
||||||||||| |||||||| ||||| ||||| ||||| || ||||||| |||||||||
Sbjct: 223 tgggagaaggaaaatgtctcaagtgaggcacttgaggctgctaggattgcttgcaacaag 282
Query: 340 tacatggccaagttcgccggaaaagacgcgttccacctccgcgtgagggtgcatcccttc 399
|||||||| ||||| || || || ||||| |||||| | | || ||||| || || |||
Sbjct: 283 tacatggctaagtttgctggcaaggacgctttccacttgagggttagggtccacccattc 342
Query: 400 cacgtgctccgcatcaacaagatgctatcgtgcgcaggtgctgacaggttgcagactggg 459
|| || || || |||||||||||||| || || || || ||||| ||| | ||||||||
Sbjct: 343 catgtccttcggatcaacaagatgctttcatgtgctggagctgataggcttcagactggc 402
Query: 460 atgagaggcgcgtttgggaaaccgcaggggacttgtgcgagggttagtattgggcaggtg 519
|||||||| || ||||| || || ||||| || ||||| |||||| ||||||||||||
Sbjct: 403 atgagaggtgcttttggaaagccacagggtacctgtgctagggttgctattgggcaggtt 462
Query: 520 ctgctttcagtgaggtgtaaggatgggaatgcggttcatgctcaggaggcgctgcgtcgc 579
|| |||||||| | || ||||| | || |||||| |||||||| || || ||
Sbjct: 463 cttctttcagtccgctgcaaggacagtaacagccatcatgcccaggaggccctacgccgt 522
Query: 580 gccaagttcaagtttcctggtcgccagaaaattattgttagcagaaagtggggatttact 639
|| ||||||||||| |||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 523 gctaagttcaagttccctggtcgtcaaaagatcattgtcagcaggaagtggggatttacc 582
Query: 640 aagtt 644
|||||
Sbjct: 583 aagtt 587
>gnl|LJGI|TC57361 homologue to UniRef100_Q9SPB3 Cluster: 60S ribosomal protein L10;
n=1; Vitis riparia|Rep: 60S ribosomal protein L10 -
Vitis riparia (Frost grape) (Vitis vulpina), complete
Length = 884
Score = 137 bits (69), Expect = 1e-31
Identities = 480/617 (77%)
Strand = Plus / Plus
Query: 127 agaccggcgaggtgttaccggcagataaagaacaaaccatacccgaaatcccgcttctgc 186
||||| || |||||||| || ||||| || ||||| |||||||| || || || ||||||
Sbjct: 59 agacctgctaggtgttatcgtcagattaaaaacaagccataccccaagtcacgtttctgc 118
Query: 187 cgcggcgtcccggacccaaagatccgaatctacgacgtcgggatgaagaagaaaggcgta 246
|| || || || || || ||||||||||| || || || || |||||||||||||| ||
Sbjct: 119 cgtggtgttcctgatcctaagatccgaatttatgatgttggtatgaagaagaaaggtgtt 178
Query: 247 gacgagttccccttctgcgtccacctcgtctcatgggagaaggagaatgtctccagtgaa 306
|| |||||||| ||||| ||||| || || |||||||| || ||||| || ||||||
Sbjct: 179 gatgagttccctttctgtgtccatctggttagctgggagaaagaaaatgtttcaagtgaa 238
Query: 307 gcactcgaggcggcgcggattgcctgcaacaagtacatggccaagttcgccggaaaagac 366
||| | || || || ||||||| |||||||| || ||||| ||||| || ||||| ||
Sbjct: 239 gcattggaagctgctaggattgcatgcaacaaatatatggcaaagtttgctggaaaggat 298
Query: 367 gcgttccacctccgcgtgagggtgcatcccttccacgtgctccgcatcaacaagatgcta 426
|| |||||| | | || || ||||| |||||||| || ||| | |||||||| |||||
Sbjct: 299 gcattccacttgagggtcagagtgcaccccttccatgttctcaggatcaacaaaatgctt 358
Query: 427 tcgtgcgcaggtgctgacaggttgcagactgggatgagaggcgcgtttgggaaaccgcag 486
|| || ||||| ||||| ||| | |||||||| |||||||| || ||||| || || |||
Sbjct: 359 tcatgtgcaggagctgataggcttcagactggtatgagaggtgcttttggaaagccccag 418
Query: 487 gggacttgtgcgagggttagtattgggcaggtgctgctttcagtgaggtgtaaggatggg 546
|| || ||||| ||||| ||||| ||||| || ||||| || | |||||||| |
Sbjct: 419 ggtacatgtgctagggtggccattggccaggttcttctttccgtccgctgtaaggacagc 478
Query: 547 aatgcggttcatgctcaggaggcgctgcgtcgcgccaagttcaagtttcctggtcgccag 606
|| ||||| |||||||| || ||||| || ||||| ||||| |||||||| |||
Sbjct: 479 aacagccaccatgcacaggaggcccttcgtcgtgctaagtttaagttccctggtcgtcag 538
Query: 607 aaaattattgttagcagaaagtggggatttactaagttgagcagaagtgattacttgagg 666
|| || ||||||||||| || ||||| || || ||||| ||||| | |||||| | | |
Sbjct: 539 aagatcattgttagcaggaaatggggtttcaccaagtttagcaggactgattatcttaag 598
Query: 667 ttgaagtctgagaacagaattgtggctgatggggtcaattgcaaggttcttgggtgccat 726
| ||||| |||||||||||| || ||||||| || ||| ||| |||||||||| |||
Sbjct: 599 tacaagtcagagaacagaattttgcctgatggtgtgaatgctaagcttcttgggtgtcat 658
Query: 727 ggacctttggcgaatcg 743
||||| ||||| |||||
Sbjct: 659 ggaccattggcaaatcg 675
>gnl|LJGI|TC66979 homologue to UniRef100_A7NXZ2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 621
Score = 87.7 bits (44), Expect = 1e-16
Identities = 152/188 (80%)
Strand = Plus / Plus
Query: 556 catgctcaggaggcgctgcgtcgcgccaagttcaagtttcctggtcgccagaaaattatt 615
||||| |||||||| || ||||| || ||||| ||||| |||||||| ||||| || |||
Sbjct: 225 catgcacaggaggcccttcgtcgtgctaagtttaagttccctggtcgtcagaagatcatt 284
Query: 616 gttagcagaaagtggggatttactaagttgagcagaagtgattacttgaggttgaagtct 675
|||||||| || ||||| || || ||||| ||||| | |||||| | | || |||||
Sbjct: 285 gttagcaggaaatggggtttcaccaagtttagcaggactgattatcttaagtacaagtca 344
Query: 676 gagaacagaattgtggctgatggggtcaattgcaaggttcttgggtgccatggacctttg 735
|||||||||||| || ||||||| || ||| ||| |||||||||| |||||||| |||
Sbjct: 345 gagaacagaattttgcctgatggtgtgaatgctaagcttcttgggtgtcatggaccattg 404
Query: 736 gcgaatcg 743
|| |||||
Sbjct: 405 gcaaatcg 412
>gnl|LJGI|TC82008 similar to UniRef100_A1CSY1 Cluster: 60S ribosomal protein L10;
n=1; Aspergillus clavatus|Rep: 60S ribosomal protein L10
- Aspergillus clavatus, partial (45%)
Length = 380
Score = 52.0 bits (26), Expect = 5e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 403 gtgctccgcatcaacaagatgctatcgtgcgcaggtgctgacaggttgcagactgggatg 462
||||||||||||| |||||||| |||||||| || ||||| || ||||||| || |||
Sbjct: 1 gtgctccgcatcacaaagatgctctcgtgcgccggcgctgatcggctgcagacgggcatg 60
Query: 463 agaggcgcgtttgggaaaccgcaggg 488
| || |||||||| || ||||||||
Sbjct: 61 cgcggtgcgtttggcaagccgcaggg 86