Miyakogusa Predicted Gene
- Lj2g3v2448190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2448190.1 CUFF.38979.1
(1239 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63118 similar to UniRef100_Q84ND6 Cluster: Cation dif... 2456 0.0
gnl|LJGI|TC74399 similar to UniRef100_A7P017 Cluster: Chromosome... 636 0.0
gnl|LJGI|TC60600 UniRef100_Q9BBQ8 Cluster: Photosystem II P680 c... 202 4e-51
gnl|LJGI|GO012918 similar to UniRef100_Q84ND6 Cluster: Cation di... 151 1e-35
>gnl|LJGI|TC63118 similar to UniRef100_Q84ND6 Cluster: Cation diffusion facilitator 8;
n=1; Stylosanthes hamata|Rep: Cation diffusion
facilitator 8 - Stylosanthes hamata (Caribbean stylo),
partial (90%)
Length = 1439
Score = 2456 bits (1239), Expect = 0.0
Identities = 1239/1239 (100%)
Strand = Plus / Plus
Query: 1 atggacggagattcgggttcggatcccacgaaaccgctgttaataaaaaatggccggacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atggacggagattcgggttcggatcccacgaaaccgctgttaataaaaaatggccggacc 193
Query: 61 accaccgccgcctccgaacacgacggactcgctcgccggaactcgattcactcgctcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 accaccgccgcctccgaacacgacggactcgctcgccggaactcgattcactcgctcaga 253
Query: 121 tccaactttctgtctacgcttcccgataaggtccgttctgttcttgaccctgagtctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tccaactttctgtctacgcttcccgataaggtccgttctgttcttgaccctgagtctccc 313
Query: 181 ttcgacgttgatctctccaacgccaccgccttaagccaaggggagaaagagtactatgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttcgacgttgatctctccaacgccaccgccttaagccaaggggagaaagagtactatgag 373
Query: 241 agacaatttgctactctcaaatcgtttgaggaagtggattgcattgaggaatctgatagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agacaatttgctactctcaaatcgtttgaggaagtggattgcattgaggaatctgatagt 433
Query: 301 tgcaataatgttgacgaggataatcaagaacaggctcaacaagagtgggcaatgaagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgcaataatgttgacgaggataatcaagaacaggctcaacaagagtgggcaatgaagatt 493
Query: 361 tcaaattacgccaatgttgctctcttgatattgaagatttatgccacattaaggagtggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tcaaattacgccaatgttgctctcttgatattgaagatttatgccacattaaggagtggg 553
Query: 421 tcaatagctattgcagcatcaactttggattctttgcttgatctcatggctggtggcata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tcaatagctattgcagcatcaactttggattctttgcttgatctcatggctggtggcata 613
Query: 481 ctctggttcactcacgtctcaatgaagaacatcaatatctacaagtaccccattggaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctctggttcactcacgtctcaatgaagaacatcaatatctacaagtaccccattggaaag 673
Query: 541 ttgagggtgcagcctgtgggtataatcgtctttgcggccatcatggcaacacttggattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttgagggtgcagcctgtgggtataatcgtctttgcggccatcatggcaacacttggattt 733
Query: 601 caggtgctaatcacagccgtacagcaactaatacaaaacagcccaagtgaaaagatgtct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 caggtgctaatcacagccgtacagcaactaatacaaaacagcccaagtgaaaagatgtct 793
Query: 661 acagagcagctaatatggttgtactctattatgatattagcaacggtggtgaagcttatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 acagagcagctaatatggttgtactctattatgatattagcaacggtggtgaagcttatt 853
Query: 721 ctctggctttactgcagaagctcagggaacaagattgtccgtgcctatgcagatgatcac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 ctctggctttactgcagaagctcagggaacaagattgtccgtgcctatgcagatgatcac 913
Query: 781 cactttgatgttataacaaatgtggttggattagttgcggctgttcttggtgataaattt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 cactttgatgttataacaaatgtggttggattagttgcggctgttcttggtgataaattt 973
Query: 841 tactggtggattgacccggttggagctattgtgcttgcactttatacgatttcaaattgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 tactggtggattgacccggttggagctattgtgcttgcactttatacgatttcaaattgg 1033
Query: 901 tctcgcactgtcatggaaaatgcagtttcactagtaggacaaactgcacctcctgaagtt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 tctcgcactgtcatggaaaatgcagtttcactagtaggacaaactgcacctcctgaagtt 1093
Query: 961 ttgcagaagctgacatatctcgttataaggcacccgcaaattaagcgtgttgacaccgtc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 ttgcagaagctgacatatctcgttataaggcacccgcaaattaagcgtgttgacaccgtc 1153
Query: 1021 cgcgcatacacatttggcgttctatattttgtggaggttgacattgaactgccagaagat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 cgcgcatacacatttggcgttctatattttgtggaggttgacattgaactgccagaagat 1213
Query: 1081 ttacccttaaaagaagcgcatacgattggagagactctgcagataaagcttgagaagctt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 ttacccttaaaagaagcgcatacgattggagagactctgcagataaagcttgagaagctt 1273
Query: 1141 ccagacgttgagcgggcatttgttcatctagacttcgagtgtgatcacaaaccggagcac 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 ccagacgttgagcgggcatttgttcatctagacttcgagtgtgatcacaaaccggagcac 1333
Query: 1201 tcagttctcagcaaactgcccaacaaccagccgtaagca 1239
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 tcagttctcagcaaactgcccaacaaccagccgtaagca 1372
>gnl|LJGI|TC74399 similar to UniRef100_A7P017 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 501
Score = 636 bits (321), Expect = 0.0
Identities = 324/325 (99%)
Strand = Plus / Plus
Query: 915 ggaaaatgcagtttcactagtaggacaaactgcacctcctgaagttttgcagaagctgac 974
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2 ggaaaatgcagtttcactagtaggacaaactgcacctcttgaagttttgcagaagctgac 61
Query: 975 atatctcgttataaggcacccgcaaattaagcgtgttgacaccgtccgcgcatacacatt 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atatctcgttataaggcacccgcaaattaagcgtgttgacaccgtccgcgcatacacatt 121
Query: 1035 tggcgttctatattttgtggaggttgacattgaactgccagaagatttacccttaaaaga 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tggcgttctatattttgtggaggttgacattgaactgccagaagatttacccttaaaaga 181
Query: 1095 agcgcatacgattggagagactctgcagataaagcttgagaagcttccagacgttgagcg 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agcgcatacgattggagagactctgcagataaagcttgagaagcttccagacgttgagcg 241
Query: 1155 ggcatttgttcatctagacttcgagtgtgatcacaaaccggagcactcagttctcagcaa 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggcatttgttcatctagacttcgagtgtgatcacaaaccggagcactcagttctcagcaa 301
Query: 1215 actgcccaacaaccagccgtaagca 1239
|||||||||||||||||||||||||
Sbjct: 302 actgcccaacaaccagccgtaagca 326
>gnl|LJGI|TC60600 UniRef100_Q9BBQ8 Cluster: Photosystem II P680 chlorophyll A
apoprotein; n=1; Lotus japonicus|Rep: Photosystem II P680
chlorophyll A apoprotein - Lotus japonicus, partial (24%)
Length = 795
Score = 202 bits (102), Expect = 4e-51
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 1134 gaagcttccagacgttgagcgggcatttgttcatctagacttcgagtgtgatcacaaacc 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gaagcttccagacgttgagcgggcatttgttcatctagacttcgagtgtgatcacaaacc 598
Query: 1194 ggagcactcagttctcagcaaactgcccaacaaccagccgta 1235
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ggagcactcagttctcagcaaactgcccaacaaccagccgta 640
>gnl|LJGI|GO012918 similar to UniRef100_Q84ND6 Cluster: Cation diffusion facilitator
8; n=1; Stylosanthes hamata|Rep: Cation diffusion
facilitator 8 - Stylosanthes hamata (Caribbean stylo),
partial (35%)
Length = 781
Score = 151 bits (76), Expect = 1e-35
Identities = 145/168 (86%)
Strand = Plus / Plus
Query: 436 gcatcaactttggattctttgcttgatctcatggctggtggcatactctggttcactcac 495
||||| || ||||||||| ||||||| |||||||||||||||| || ||||||||||||
Sbjct: 504 gcatcgacattggattctctgcttgacttcatggctggtggcattctttggttcactcac 563
Query: 496 gtctcaatgaagaacatcaatatctacaagtaccccattggaaagttgagggtgcagcct 555
| ||||||||||||| || || || || ||||| ||||||||||||||| |||||||
Sbjct: 564 cttgcaatgaagaacataaacatgtataaataccctattggaaagttgaggatgcagcca 623
Query: 556 gtgggtataatcgtctttgcggccatcatggcaacacttggatttcag 603
||||| |||||||||||||| || |||||||||||||||| ||||||
Sbjct: 624 gtgggcataatcgtctttgcagctgtcatggcaacacttggttttcag 671
Score = 81.8 bits (41), Expect = 9e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 211 ttaagccaaggggagaaagagtactatgagagacaatttgctactctcaaatcgtttgag 270
||||||||||| |||||||| |||||||| |||||||||||||||| ||||| ||||||
Sbjct: 285 ttaagccaaggagagaaagaatactatgaaggacaatttgctactctaaaatcatttgag 344
Query: 271 gaagt 275
|||||
Sbjct: 345 gaagt 349