Miyakogusa Predicted Gene
- Lj2g3v2448180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2448180.1 Non Chatacterized Hit- tr|I3T4M5|I3T4M5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.59,0,Eukaryotic type KH-domain (KH-domain type I),NULL;
RNA-BINDING PROTEIN RELATED,NULL; K homology RNA-,CUFF.38980.1
(858 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70263 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 1031 0.0
gnl|LJGI|TC72746 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 714 0.0
gnl|LJGI|TC67728 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 400 e-111
gnl|LJGI|TC57961 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 60 2e-08
>gnl|LJGI|TC70263 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 680
Score = 1031 bits (520), Expect = 0.0
Identities = 529/532 (99%)
Strand = Plus / Plus
Query: 1 atgtctaatatgtacaatcagatttcctcaccttcatcccaaagggctaattctccaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atgtctaatatgtacaatcagatttcctcaccttcatcccaaagggctaattctccaaat 208
Query: 61 ataaacatgagaagcaattttgatgttgatagtcaatacttagcggagccgctagctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 209 ataaacatgagaagcaattttgatgttgatagtcaatacttagcggagctgctagctgaa 268
Query: 121 caccagaaactcagacctttcatgcaactcctgccctcgtgtagcagacttctcaatcaa 180
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 269 caccagaaactcagacctttcatgcaagtcctgcccttgtgtagcagacttctcaatcaa 328
Query: 181 gagattttaagggcttctgggaagaatggaatgttgcagaaccaagggtttagtgacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gagattttaagggcttctgggaagaatggaatgttgcagaaccaagggtttagtgacttt 388
Query: 241 gatagattgcaagtcttaagccccggtcatatgacttcttcagagttaacgccaaacttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gatagattgcaagtcttaagccccggtcatatgacttcttcagagttaacgccaaacttc 448
Query: 301 tcaggatggaacagcctgtctcatgaacagaggttggctggagcacagggactaaacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcaggatggaacagcctgtctcatgaacagaggttggctggagcacagggactaaacatg 508
Query: 361 gattggcaagcaccaccagctgttccaagttctcacatagtgaagaagatattgcgcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gattggcaagcaccaccagctgttccaagttctcacatagtgaagaagatattgcgcttg 568
Query: 421 gatattcctatggaaagctactcaaatcttaattttgttgggcggcttcttggtcctagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gatattcctatggaaagctactcaaatcttaattttgttgggcggcttcttggtcctagg 628
Query: 481 ggtaattcactgaagcgagttgaagctaccacgggttgccgtgtatatatca 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ggtaattcactgaagcgagttgaagctaccacgggttgccgtgtatatatca 680
>gnl|LJGI|TC72746 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 678
Score = 714 bits (360), Expect = 0.0
Identities = 363/364 (99%)
Strand = Plus / Plus
Query: 495 gcgagttgaagctaccacgggttgccgtgtatatatcagagggaaaggttcaattaagga 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgagttgaagctaccacgggttgccgtgtatatatcagagggaaaggttcaattaagga 60
Query: 555 cctagacaaggaagacttgttaaggggaaggccgggctatgagcacctgagtgaaccgct 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctagacaaggaagacttgttaaggggaaggccgggctatgagcacctgagtgaaccgct 120
Query: 615 tcacattttgattgaagctgaactacctgccaatattgttgatgtaaggttgaggcaagc 674
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcacattttgattgaagctgagctacctgccaatattgttgatgtaaggttgaggcaagc 180
Query: 675 acaggaaatcatcgaagagatacttaagcccgtggatgaatcacaggacttttacaagag 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaggaaatcatcgaagagatacttaagcccgtggatgaatcacaggacttttacaagag 240
Query: 735 acagcaactaagagagcgtgcaatgctcaattccaattttagagaagagagccctcaact 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagcaactaagagagcgtgcaatgctcaattccaattttagagaagagagccctcaact 300
Query: 795 tagcggtagtgtctctccattcacttctaatgaaataaaacgggcaaaaacggatcaata 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagcggtagtgtctctccattcacttctaatgaaataaaacgggcaaaaacggatcaata 360
Query: 855 atgg 858
||||
Sbjct: 361 atgg 364
>gnl|LJGI|TC67728 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1450
Score = 400 bits (202), Expect = e-111
Identities = 430/506 (84%)
Strand = Plus / Plus
Query: 349 ggactaaacatggattggcaagcaccaccagctgttccaagttctcacatagtgaagaag 408
|||||||| ||||||||||| || |||| |||| |||| ||||| ||| ||||||| |
Sbjct: 514 ggactaaatgtggattggcaaacaacaccttctgtgccaaattctcccattgtgaagagg 573
Query: 409 atattgcgcttggatattcctatggaaagctactcaaatcttaattttgttgggcggctt 468
|| ||||||||||| ||||||| || ||||| ||||| | ||||| |||||| |||||
Sbjct: 574 atcttgcgcttggacattcctagtgatagctatccaaatttcaatttcgttgggaggctt 633
Query: 469 cttggtcctaggggtaattcactgaagcgagttgaagctaccacgggttgccgtgtatat 528
||||| ||| |||||||||||||||||||||| || |||||||| ||||||||||||| |
Sbjct: 634 cttggccctcggggtaattcactgaagcgagtcgaggctaccacaggttgccgtgtattt 693
Query: 529 atcagagggaaaggttcaattaaggacctagacaaggaagacttgttaaggggaaggccg 588
|| |||||| |||||||||| || |||| ||| |||||||| | |||||||||| |||
Sbjct: 694 attagagggcaaggttcaataaaagacccagataaggaagaggttttaaggggaaagcca 753
Query: 589 ggctatgagcacctgagtgaaccgcttcacattttgattgaagctgaactacctgccaat 648
|||||||||||||||| |||||| || ||| |||||||||| ||||||||||||| ||||
Sbjct: 754 ggctatgagcacctgaatgaaccactgcacgttttgattgaggctgaactacctgtcaat 813
Query: 649 attgttgatgtaaggttgaggcaagcacaggaaatcatcgaagagatacttaagcccgtg 708
|||||||| ||||| ||||||||||||| |||||||| ||| | |||| || |||| |
Sbjct: 814 gttgttgatataaggctgaggcaagcacaagaaatcatagaaaatctactcaaacccgcg 873
Query: 709 gatgaatcacaggacttttacaagagacagcaactaagagagcgtgcaatgctcaattcc 768
||||| |||||||||| |||||||| || ||||| ||||| | ||| ||||| ||||||
Sbjct: 874 gatgagacacaggacttctacaagaggcaacaactgagagaacttgccatgctgaattcc 933
Query: 769 aattttagagaagagagccctcaacttagcggtagtgtctctccattcacttctaatgaa 828
||||| |||||||||||||||||||| || |||||| ||||||||||||| |||||||||
Sbjct: 934 aatttcagagaagagagccctcaactgagtggtagtctctctccattcacctctaatgaa 993
Query: 829 ataaaacgggcaaaaacggatcaata 854
|| ||| |||| ||||| || |||||
Sbjct: 994 atcaaaagggcgaaaactgaccaata 1019
Score = 186 bits (94), Expect = 2e-46
Identities = 193/226 (85%)
Strand = Plus / Plus
Query: 11 tgtacaatcagatttcctcaccttcatcccaaagggctaattctccaaatataaacatga 70
|||||||||| |||||||||||| || | |||||| | ||| |||||||||||||| |
Sbjct: 191 tgtacaatcaaatttcctcacctgcaacagcaagggccagttcaccaaatataaacatca 250
Query: 71 gaagcaattttgatgttgatagtcaatacttagcggagccgctagctgaacaccagaaac 130
||||||||||| ||||||||||||| |||||||| |||| | ||| ||| |||||||||
Sbjct: 251 gaagcaattttaatgttgatagtcagtacttagcagagctgttagaagaataccagaaac 310
Query: 131 tcagacctttcatgcaactcctgccctcgtgtagcagacttctcaatcaagagattttaa 190
| ||||||||||||||| |||| |||| |||| |||||| | ||||||||||| ||||
Sbjct: 311 taagacctttcatgcaagtcctacccttatgtaccagactcttaaatcaagagatcttaa 370
Query: 191 gggcttctgggaagaatggaatgttgcagaaccaagggtttagtga 236
||| |||||||||||||||| || | ||||||||||| ||||||||
Sbjct: 371 gggtttctgggaagaatggattgattcagaaccaaggatttagtga 416
>gnl|LJGI|TC57961 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1268
Score = 60.0 bits (30), Expect = 2e-08
Identities = 189/242 (78%)
Strand = Plus / Plus
Query: 451 aattttgttgggcggcttcttggtcctaggggtaattcactgaagcgagttgaagctacc 510
||||||||||| | ||||| || ||||| || ||||| ||||| || || ||||| ||
Sbjct: 497 aattttgttggaagacttctgggacctagaggcaattctctgaaacgggtagaagcaaca 556
Query: 511 acgggttgccgtgtatatatcagagggaaaggttcaattaaggacctagacaaggaagac 570
|| |||||| | || | ||| ||||| | ||| || || ||||| | ||||||||||||
Sbjct: 557 acaggttgcagggtgtttattagaggaacaggatctataaaggatccagacaaggaagag 616
Query: 571 ttgttaaggggaaggccgggctatgagcacctgagtgaaccgcttcacattttgattgaa 630
|||||| |||| || ||||||||||| || ||| ||||| ||||| ||||| ||
Sbjct: 617 aagttaagaggaaaaccaggctatgagcatctctatgagccgctccacatattgatcgag 676
Query: 631 gctgaactacctgccaatattgttgatgtaaggttgaggcaagcacaggaaatcatcgaa 690
||||| ||||||| ||||||||||| | ||| | ||||| || ||||||||||| |||
Sbjct: 677 gctgatttacctgctaatattgttgacatcaggcttaggcaggctcaggaaatcatagaa 736
Query: 691 ga 692
||
Sbjct: 737 ga 738