Miyakogusa Predicted Gene
- Lj2g3v2412460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2412460.1 Non Chatacterized Hit- tr|I1LLV0|I1LLV0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23092
PE,67.45,0,ARM_REPEAT,Armadillo; no description,Zinc finger,
RING/FYVE/PHD-type; no description,Armadillo-like ,CUFF.38929.1
(2352 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72918 weakly similar to UniRef100_Q84TU4 Cluster: Arm... 1047 0.0
gnl|LJGI|BW631606 similar to UniRef100_A7PLL3 Cluster: Chromosom... 926 0.0
gnl|LJGI|TC67089 similar to UniRef100_Q84TU4 Cluster: Arm repeat... 862 0.0
gnl|LJGI|TC73161 similar to UniRef100_Q84TU4 Cluster: Arm repeat... 141 2e-32
gnl|LJGI|AV417495 similar to UniRef100_A7PLL3 Cluster: Chromosom... 131 2e-29
gnl|LJGI|BP075149 similar to UniRef100_A7PLL3 Cluster: Chromosom... 56 1e-06
gnl|LJGI|TC76504 similar to UniRef100_A8TXE8 Cluster: N-Myc; n=1... 54 4e-06
>gnl|LJGI|TC72918 weakly similar to UniRef100_Q84TU4 Cluster: Arm repeat-containing
protein; n=1; Nicotiana tabacum|Rep: Arm
repeat-containing protein - Nicotiana tabacum (Common
tobacco), partial (13%)
Length = 928
Score = 1047 bits (528), Expect = 0.0
Identities = 531/532 (99%)
Strand = Plus / Plus
Query: 1 atggagatatctgtgttaaaggcgctctctaaaggcatatcctcatttttgcatttatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atggagatatctgtgttaaaggcgctctctaaaggcatatcctcatttttgcatttatca 456
Query: 61 tcttctggaaaaataaactcagaacttgtatcaaactattatgagaaggcagagaagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcttctggaaaaataaactcagaacttgtatcaaactattatgagaaggcagagaagatg 516
Query: 121 ctgaatcttttgaaaccaattgttgatgtcactgttcagtctggtttagcttctaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctgaatcttttgaaaccaattgttgatgtcactgttcagtctggtttagcttctaatgaa 576
Query: 181 gagcttagtaagctattcaaggaacttggtctggctgttgatgagttgagggagcttatc 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gagcttagtaagttattcaaggaacttggtctggctgttgatgagttgagggagcttatc 636
Query: 241 gagaactggcatatattatctagcaaattttactttgttgtgcaagttgaacccttgata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gagaactggcatatattatctagcaaattttactttgttgtgcaagttgaacccttgata 696
Query: 301 tcaagaattcaggtttcagggttcaatatcttagagcagctgaaggtttcgcagcaacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tcaagaattcaggtttcagggttcaatatcttagagcagctgaaggtttcgcagcaacgt 756
Query: 361 ctccccgatgatttgggacctgaaacttcatctgccattgaagaagccattattgaacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ctccccgatgatttgggacctgaaacttcatctgccattgaagaagccattattgaacaa 816
Query: 421 ctggaaggtgcaggagccagttcagaggtgctcgctgagatttccgagaaccttagcctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ctggaaggtgcaggagccagttcagaggtgctcgctgagatttccgagaaccttagcctg 876
Query: 481 aggtctaatcaagaggttctaattgaggctgtggcccttcaaaagttgaaag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aggtctaatcaagaggttctaattgaggctgtggcccttcaaaagttgaaag 928
>gnl|LJGI|BW631606 similar to UniRef100_A7PLL3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 480
Score = 926 bits (467), Expect = 0.0
Identities = 470/471 (99%)
Strand = Plus / Plus
Query: 1236 tattcctgaaggcatagaaggtgataatatgcggtcggccaattcagttggcattgaaga 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tattcctgaaggcatagaaggtgataatatgcggtcggccaattcagttggcattgaaga 69
Query: 1296 tacttctggggaactaaatccaaggccagatacagccgccatgccaacgccgcagagaga 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tacttctggggaactaaatccaaggccagatacagccgccatgccaacgccgcagagaga 129
Query: 1356 gcctgagattttatctcaactgccggagccaaggtctcaaaggcaatctgtgtggcaatg 1415
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 130 gcctgagattttatctcaactgccggagccaaggtctcaaaggcaatctgcgtggcaatg 189
Query: 1416 gtcttcagagagattccctcctaggacagtattatctcctcctgttgaaacaagagatga 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gtcttcagagagattccctcctaggacagtattatctcctcctgttgaaacaagagatga 249
Query: 1476 tctttctgatactgaagctcaggttcggaaattggtggaccaattgaagagtgagtctct 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tctttctgatactgaagctcaggttcggaaattggtggaccaattgaagagtgagtctct 309
Query: 1536 tgatactcagcgagaggcaatagttgagctccgccttctcgctaagcagaatatggataa 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgatactcagcgagaggcaatagttgagctccgccttctcgctaagcagaatatggataa 369
Query: 1596 tcgaattgtgataacaaattgtggatgcattggcttattgattgatttacttcaatcaac 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcgaattgtgataacaaattgtggatgcattggcttattgattgatttacttcaatcaac 429
Query: 1656 tgatccaataatccaggaaaattccgttacagcccttcttaacttgtcaat 1706
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgatccaataatccaggaaaattccgttacagcccttcttaacttgtcaat 480
>gnl|LJGI|TC67089 similar to UniRef100_Q84TU4 Cluster: Arm repeat-containing protein;
n=1; Nicotiana tabacum|Rep: Arm repeat-containing protein
- Nicotiana tabacum (Common tobacco), partial (18%)
Length = 895
Score = 862 bits (435), Expect = 0.0
Identities = 435/435 (100%)
Strand = Plus / Plus
Query: 1918 aaagatgcttccactgctttgtttaatttgtcgatttctcatgaaaacaaggaccggatc 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aaagatgcttccactgctttgtttaatttgtcgatttctcatgaaaacaaggaccggatc 64
Query: 1978 gtgcaagcgggtgctgtaaagcacctagtagagttaatggaccctgcagccggaatggtt 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gtgcaagcgggtgctgtaaagcacctagtagagttaatggaccctgcagccggaatggtt 124
Query: 2038 gataaggcggtggctgttttagcaaatcttgcaaccttactagaaggaagaagatcaatt 2097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gataaggcggtggctgttttagcaaatcttgcaaccttactagaaggaagaagatcaatt 184
Query: 2098 gctcaggaaggtgggattcccggtctggttgaggttgtggaattgggttcggctagaggg 2157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gctcaggaaggtgggattcccggtctggttgaggttgtggaattgggttcggctagaggg 244
Query: 2158 aaggagaacgcagcggcggctcttctacatctatgctctgacagtcacaaagttttgaac 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aaggagaacgcagcggcggctcttctacatctatgctctgacagtcacaaagttttgaac 304
Query: 2218 actgtcctccaagagggagctgtgcccccattagtagcattgtcaaagtcaggaacacca 2277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 actgtcctccaagagggagctgtgcccccattagtagcattgtcaaagtcaggaacacca 364
Query: 2278 agggccaaagagaaggccctggctcttcttaatcaatttagaaaccaaagacatggtggt 2337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agggccaaagagaaggccctggctcttcttaatcaatttagaaaccaaagacatggtggt 424
Query: 2338 gctggaagggcttga 2352
|||||||||||||||
Sbjct: 425 gctggaagggcttga 439
>gnl|LJGI|TC73161 similar to UniRef100_Q84TU4 Cluster: Arm repeat-containing protein;
n=1; Nicotiana tabacum|Rep: Arm repeat-containing protein
- Nicotiana tabacum (Common tobacco), partial (9%)
Length = 552
Score = 141 bits (71), Expect = 2e-32
Identities = 161/191 (84%)
Strand = Plus / Plus
Query: 2140 ttgggttcggctagagggaaggagaacgcagcggcggctcttctacatctatgctctgac 2199
|||||||| || ||||| |||||||| ||||| || |||||||||||||| |||| ||
Sbjct: 8 ttgggttcagcaagaggaaaggagaatgcagccgcagctcttctacatctttgcttacac 67
Query: 2200 agtcacaaagttttgaacactgtcctccaagagggagctgtgcccccattagtagcattg 2259
||| || | |||| | ||| || |||||| | |||||||| || ||||||||||| ||
Sbjct: 68 agtaaccgatttttaagcacggtgctccaacaaggagctgttccaccattagtagcctta 127
Query: 2260 tcaaagtcaggaacaccaagggccaaagagaaggccctggctcttcttaatcaatttaga 2319
||| ||||||| || |||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 128 tcacagtcaggcaccccaagggccaaagagaaggcccaggctctccttaatcaatttaga 187
Query: 2320 aaccaaagaca 2330
| |||||||||
Sbjct: 188 agccaaagaca 198
>gnl|LJGI|AV417495 similar to UniRef100_A7PLL3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 301
Score = 131 bits (66), Expect = 2e-29
Identities = 183/222 (82%)
Strand = Plus / Plus
Query: 1533 tcttgatactcagcgagaggcaatagttgagctccgccttctcgctaagcagaatatgga 1592
||||||||||||| ||||||||| ||| || ||||| |||| || ||||| ||||||||
Sbjct: 80 tcttgatactcagagagaggcaacagtagaaatccgctttcttgcaaagcacaatatgga 139
Query: 1593 taatcgaattgtgataacaaattgtggatgcattggcttattgattgatttacttcaatc 1652
||||||||||| || |||| |||||| |||| ||||||| |||| |||||| ||||
Sbjct: 140 taatcgaattgcaattgcaaactgtggagccattagcttattagttgagttacttaaatc 199
Query: 1653 aactgatccaataatccaggaaaattccgttacagcccttcttaacttgtcaatcaatgt 1712
|||||| ||| |||||||||||| | ||||| || ||||| ||||| ||||| ||||
Sbjct: 200 cactgatacaagaatccaggaaaacgctgttactgcacttctcaacttatcaattaatga 259
Query: 1713 taacaacaaaaccacaattgcaaatgctggtgcaattgaacc 1754
||||||||| | | |||||||||||||| |||||||||||
Sbjct: 260 caacaacaaagctgctattgcaaatgctggagcaattgaacc 301
>gnl|LJGI|BP075149 similar to UniRef100_A7PLL3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 480
Score = 56.0 bits (28), Expect = 1e-06
Identities = 96/116 (82%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 2080 gaaggaagaagatcaattgctcaggaaggtgggattcccggtctggttgaggttgtggaa 2139
|||||||||| |||||| |||||||||||||| |||| ||| || |||||||| ||
Sbjct: 478 gaaggaagaaatgcaattggccaggaaggtgggatacccgttcttgtcgaggttgtcgag 419
Query: 2140 ttgggttcggctaga-gggaaggagaacgcagcggcggctcttctacatctatgct 2194
|||||||| || ||| || |||||||| ||| | || |||||||||||||| ||||
Sbjct: 418 ttgggttcagc-agacggaaaggagaatgcaaccgcagctcttctacatctttgct 364
>gnl|LJGI|TC76504 similar to UniRef100_A8TXE8 Cluster: N-Myc; n=1; Petromyzon
marinus|Rep: N-Myc - Petromyzon marinus (Sea lamprey),
partial (4%)
Length = 543
Score = 54.0 bits (27), Expect = 4e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 35 gcatatcctcatttttgcatttatcat 61
|||||||||||||||||||||||||||
Sbjct: 515 gcatatcctcatttttgcatttatcat 541