Miyakogusa Predicted Gene
- Lj2g3v2376960.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2376960.2 Non Chatacterized Hit- tr|I3SKV8|I3SKV8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,Winged helix-turn-helix transcription repressor
DNA-binding; no description,NULL; Met,CUFF.38907.2
(1077 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80363 weakly similar to UniRef100_A7PJA8 Cluster: Chr... 2095 0.0
gnl|LJGI|BP047609 similar to UniRef100_A7PJA5 Cluster: Chromosom... 262 4e-69
gnl|LJGI|AV427028 weakly similar to UniRef100_A7PJB6 Cluster: Ch... 256 3e-67
gnl|LJGI|AV780673 weakly similar to UniRef100_A7PJA8 Cluster: Ch... 218 5e-56
gnl|LJGI|BP038245 weakly similar to UniRef100_A7PJB6 Cluster: Ch... 192 3e-48
gnl|LJGI|BE122534 143 3e-33
gnl|LJGI|FS337824 weakly similar to UniRef100_A5HK00 Cluster: O-... 54 2e-06
>gnl|LJGI|TC80363 weakly similar to UniRef100_A7PJA8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (97%)
Length = 1154
Score = 2095 bits (1057), Expect = 0.0
Identities = 1072/1077 (99%)
Strand = Plus / Plus
Query: 1 atggaattcaaagatggagagaatgctgctaaattgcttcgagctcaaagccacatatgg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 15 atggaattcaaagatggagagaatgctgctaaattgcttcgggctcaaagccacatatgg 74
Query: 61 aatcacattttgagctacataaactccatgtcccttaaatgtgtagttgatctaggcatt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 75 aatcacattttgagctacataaactccatgtcccttaaatgcgtagttgatctaggcatt 134
Query: 121 ccagatatcattcacaactatggcaaacccatgccactctcaaagctcattgcttcacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ccagatatcattcacaactatggcaaacccatgccactctcaaagctcattgcttcacta 194
Query: 181 ccaatccactcatccaaagccggcaacatccctcgcttgatgcgagtcatgatccattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ccaatccactcatccaaagccggcaacatccctcgcttgatgcgagtcatgatccattct 254
Query: 241 ggcttcttctctcaacacaatatcacagagaatgagctagaagtggagtatacactaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggcttcttctctcaacacaatatcacagagaatgagctagaagtggagtatacactaact 314
Query: 301 gatgattctattctgctccttaagggtcaccccttcagtattctgccttttttgctttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gatgattctattctgctccttaagggtcaccccttcagtattctgccttttttgctttgc 374
Query: 361 tccaatgatccaattttgaaaaagccgtggcatcatttgtcaacttggttcaaaaatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tccaatgatccaattttgaaaaagccgtggcatcatttgtcaacttggttcaaaaatgat 434
Query: 421 gatcttacaccctttgaaacagcacacgggatgttgccatgggattatgctaaccgtgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gatcttacaccctttgaaacagcacacgggatgttgccatgggattatgctaaccgtgac 494
Query: 481 cccaaagttaataacttattaaatgaatccatggcatgtgatgctcaattgattgccggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cccaaagttaataacttattaaatgaatccatggcatgtgatgctcaattgattgccggt 554
Query: 541 gtgtttatagagaagtgcaaggatatgttgaatggattggagtcattggttgatgttggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtgtttatagagaagtgcaaggatatgttgaatggattggagtcattggttgatgttggg 614
Query: 601 ggaggcacagggaccatggcaagggcaattgctaaatcattcccacgtttgaagtgcact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ggaggcacagggaccatggcaagggcaattgctaaatcattcccacgtttgaagtgcact 674
Query: 661 gtgtttgatctcccacatgttgttgctgatttgcaaggaagtgagaaccttgaatatatt 720
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gtgtttggtctcccacatgttgttgctgatttgcaaggaagtgagaaccttgaatatatt 734
Query: 721 ggaggggacatgtttaaggaaattcctccggcggatgccattttgctgaagtggatattg 780
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 735 ggaggggacatgtttaaggaaattcctccggcggatgccactttgctgaagtggatattg 794
Query: 781 catgactggagtgatgaggaatgtctaaaaatactaaagaattgcaaggaagcaataaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 catgactggagtgatgaggaatgtctaaaaatactaaagaattgcaaggaagcaataaag 854
Query: 841 agcaaaggcaaagaagggaaagtgattatcatagacatggttattgaggaagataaggga 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 ggcaaaggcaaagaagggaaagtgattatcatagacatggttattgaggaagataaggga 914
Query: 901 gatgataaatcagttgaaacacaattactctttgatatggggatgatggtgttgaccact 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 gatgataaatcagttgaaacacaattactctttgatatggggatgatggtgttgaccact 974
Query: 961 ggaaaagagagaagcatgaaagaatggggtattttgatttcctctgctggattcagtgac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 ggaaaagagagaagcatgaaagaatggggtattttgatttcctctgctggattcagtgac 1034
Query: 1021 tacaagatatctcctgttctgggattaaggtctgttgttgagatctatccatagtaa 1077
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 tacaagatatctcctgttctgggattaaggtctgttgttgagatctatccatagtaa 1091
>gnl|LJGI|BP047609 similar to UniRef100_A7PJA5 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 535
Score = 262 bits (132), Expect = 4e-69
Identities = 261/304 (85%)
Strand = Plus / Minus
Query: 771 gtggatattgcatgactggagtgatgaggaatgtctaaaaatactaaagaattgcaagga 830
||||||||||||||| ||||||||||| || ||||| |||||||||||||| ||||||||
Sbjct: 535 gtggatattgcatgattggagtgatgacgagtgtctgaaaatactaaagaaatgcaagga 476
Query: 831 agcaataaagagcaaaggcaaagaagggaaagtgattatcatagacatggttattgagga 890
|||||| ||||||||||||||||||||||| |||||||| ||||||||||| || |||||
Sbjct: 475 agcaatcaagagcaaaggcaaagaagggaaggtgattattatagacatggtgatggagga 416
Query: 891 agataagggagatgataaatcagttgaaacacaattactctttgatatggggatgatggt 950
| | |||| |||| |||||| ||||||||||||| || ||||||||||| ||||||||
Sbjct: 415 aaagaaggaagatcataaattagttgaaacacaactattctttgatatgctcatgatggt 356
Query: 951 gttgaccactggaaaagagagaagcatgaaagaatggggtattttgatttcctctgctgg 1010
|| ||| ||||||||||||| | |||||| |||| || |||||| ||||||||||
Sbjct: 355 tgtgctcaccggaaaagagagaaataagaaagagtgggttaagttgattacctctgctgg 296
Query: 1011 attcagtgactacaagatatctcctgttctgggattaaggtctgttgttgagatctatcc 1070
|||| ||||||||||||| ||| ||| | ||| |||||||| || |||||||||||||
Sbjct: 295 tttcaatgactacaagataactcaagttttaggactaaggtctattattgagatctatcc 236
Query: 1071 atag 1074
||||
Sbjct: 235 atag 232
>gnl|LJGI|AV427028 weakly similar to UniRef100_A7PJB6 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 393
Score = 256 bits (129), Expect = 3e-67
Identities = 323/385 (83%), Gaps = 7/385 (1%)
Strand = Plus / Plus
Query: 94 cttaaatgtgtagttgatctaggcattccagatatcattcacaactatggcaaacccatg 153
||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||
Sbjct: 1 cttaaatgtgtagttgaattaggcatagcagatatcatacacaactatggcaaacccatg 60
Query: 154 ccactctcaaagctcattgcttcactaccaatccactcatccaaagccggcaacatccct 213
||||||||| ||||||||||| ||||| || |||| ||||||||||| || |||||| |
Sbjct: 61 ccactctcacagctcattgctgcactagcagtccagtcatccaaagctgggaacatcaat 120
Query: 214 cgcttgatgcgagtcatgatccattctggcttcttctctcaacacaatatcacagagaat 273
|||||||||||||||||| ||||||||||||||||||| | |||||| |||| ||||||
Sbjct: 121 cgcttgatgcgagtcatggtccattctggcttcttctcgcgacacaacgtcactgagaat 180
Query: 274 gagctagaagtggagtatacactaactgatgattctattctgctccttaagggtcacccc 333
||||| || ||||||||| | || ||||||| ||| ||||||||||| |||| ||| ||
Sbjct: 181 gagctcgaggtggagtattcgcttactgatgcttcaattctgctcctgaaggatcatcct 240
Query: 334 ttcagtattctgccttttttgc--tttgctccaatgatccaattttgaaaaagccgtggc 391
|||||| | ||||| |||| |||| | ||| || |||| || |||| ||||||
Sbjct: 241 ttcagtgtgacacctttcttgcaatttgaac--ttgaaccgatttcgacaaagacgtggc 298
Query: 392 atcatttgtcaacttggttcaaa---aatgatgatcttacaccctttgaaacagcacacg 448
||||| |||||| |||||||||| | ||||||||||| |||| |||||||| ||||
Sbjct: 299 atcatatgtcaaattggttcaaaagtagtgatgatcttaacaccttcgaaacagcgcacg 358
Query: 449 ggatgttgccatgggattatgctaa 473
| |||||||| ||||||||||||||
Sbjct: 359 gtatgttgccttgggattatgctaa 383
>gnl|LJGI|AV780673 weakly similar to UniRef100_A7PJA8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 540
Score = 218 bits (110), Expect = 5e-56
Identities = 257/306 (83%)
Strand = Plus / Minus
Query: 770 agtggatattgcatgactggagtgatgaggaatgtctaaaaatactaaagaattgcaagg 829
||||||||||||||||||||| ||||||||||||||| || ||||| ||||| || ||||
Sbjct: 496 agtggatattgcatgactggaatgatgaggaatgtctgaacatactgaagaaatgtaagg 437
Query: 830 aagcaataaagagcaaaggcaaagaagggaaagtgattatcatagacatggttattgagg 889
||||||| |||| | ||||| |||||||||| |||||||||||||| ||||| || || |
Sbjct: 436 aagcaatcaagaaccaaggccaagaagggaaggtgattatcatagatatggtgatggacg 377
Query: 890 aagataagggagatgataaatcagttgaaacacaattactctttgatatggggatgatgg 949
|||| || ||||| ||| ||||||| ||||||| | |||||||||| ||||||||
Sbjct: 376 aagagaacggagaggatgaatcagtgacaacacaactcttctttgatataatgatgatgg 317
Query: 950 tgttgaccactggaaaagagagaagcatgaaagaatggggtattttgatttcctctgctg 1009
||||| | |||||||||||||| || |||||| |||| | ||||||||||| ||||
Sbjct: 316 tgttgcctcatggaaaagagagaaacaagaaagagtgggttcagttgatttcctcagctg 257
Query: 1010 gattcagtgactacaagatatctcctgttctgggattaaggtctgttgttgagatctatc 1069
| |||| | ||||||||||| ||||| || |||| ||||||||||| ||||||||||||
Sbjct: 256 gtttcaatcactacaagataactcctattttggggttaaggtctgtcattgagatctatc 197
Query: 1070 catagt 1075
||||||
Sbjct: 196 catagt 191
>gnl|LJGI|BP038245 weakly similar to UniRef100_A7PJB6 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 348
Score = 192 bits (97), Expect = 3e-48
Identities = 205/241 (85%)
Strand = Plus / Plus
Query: 1 atggaattcaaagatggagagaatgctgctaaattgcttcgagctcaaagccacatatgg 60
||||||||| || ||||||| ||||||| ||| |||||| |||||||||||||||||||
Sbjct: 108 atggaattccaaaatggagaacatgctgcgaaactgcttcaagctcaaagccacatatgg 167
Query: 61 aatcacattttgagctacataaactccatgtcccttaaatgtgtagttgatctaggcatt 120
|| ||||| ||||||| ||||||||||||| |||||||||||||||| || | | ||
Sbjct: 168 aaccacatcttgagcttcataaactccatgacccttaaatgtgtagtagactttgtaata 227
Query: 121 ccagatatcattcacaactatggcaaacccatgccactctcaaagctcattgcttcacta 180
|||||| |||||||||||||||| |||||||| ||||||||| | |||||||||||| |
Sbjct: 228 ccagatctcattcacaactatggaaaacccattccactctcacaactcattgcttcattg 287
Query: 181 ccaatccactcatccaaagccggcaacatccctcgcttgatgcgagtcatgatccattct 240
||||||||| |||| ||| || | | |||| |||||||||| | ||||||||||||||
Sbjct: 288 ccaatccacccatctaaaacctgttgcgtcccccgcttgatgcaaatcatgatccattct 347
Query: 241 g 241
|
Sbjct: 348 g 348
>gnl|LJGI|BE122534
Length = 344
Score = 143 bits (72), Expect = 3e-33
Identities = 217/264 (82%), Gaps = 1/264 (0%)
Strand = Plus / Plus
Query: 574 ggattggagtcattggttgatgttgggggaggcacagggaccatggcaagggcaattgct 633
||||||||| || |||||||||||||||||||||| ||||| | || | |||||| |||
Sbjct: 59 ggattggagacactggttgatgttgggggaggcactgggacttttgctaaggcaatagct 118
Query: 634 aaatcattcccacgtttgaagtgcactgtgtttgatctcccacatgttgttgctgatttg 693
|| |||||||||| | |||||| ||| |||||||||||||||||||| ||| |||
Sbjct: 119 aagtcattcccacaacttgagtgcattgtatttgatctcccacatgttgtctctggcttg 178
Query: 694 caaggaagtgagaaccttgaata-tattggaggggacatgtttaaggaaattcctccggc 752
||||||||||| ||| || |||| | |||||||| |||||||| ||| ||||||| | |
Sbjct: 179 caaggaagtgaaaacattaaataatgttggagggaacatgtttgaggcaattcctgcaac 238
Query: 753 ggatgccattttgctgaagtggatattgcatgactggagtgatgaggaatgtctaaaaat 812
||| |||||||| ||||||||||| ||||||| |||| |||||| ||||| | |||||
Sbjct: 239 tgattccattttgttgaagtggatactgcatgattggaatgatgaagaatgcatgaaaat 298
Query: 813 actaaagaattgcaaggaagcaat 836
| | || || |||||||| |||||
Sbjct: 299 attgaacaactgcaaggaggcaat 322
>gnl|LJGI|FS337824 weakly similar to UniRef100_A5HK00 Cluster: O-methyltransferase;
n=1; Vitis vinifera|Rep: O-methyltransferase - Vitis
vinifera (Grape), partial (31%)
Length = 798
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 118 attccagatatcattcacaactatggcaaacccat 152
||||||||||||||||||||| ||||| |||||||
Sbjct: 193 attccagatatcattcacaaccatggccaacccat 227