Miyakogusa Predicted Gene
- Lj2g3v2365820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2365820.1 Non Chatacterized Hit- tr|I1JHJ0|I1JHJ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55659 PE,91.38,0,SMALL
NUCLEAR RIBONUCLEOPROTEIN,NULL; U1 SMALL NUCLEAR RIBONUCLEOPROTEIN
A/U2 SMALL NUCLEAR RIBONUCL,CUFF.38896.1
(696 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78871 similar to UniRef100_A7NY57 Cluster: Chromosome... 565 e-160
gnl|LJGI|TC81197 similar to UniRef100_A8MRK1 Cluster: Uncharacte... 96 4e-19
gnl|LJGI|AV768549 similar to UniRef100_Q41499 Cluster: Spliceoso... 86 3e-16
>gnl|LJGI|TC78871 similar to UniRef100_A7NY57 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 590
Score = 565 bits (285), Expect = e-160
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 atgctttcaggtgacatacctccgagccaaaccatttacatcaagaatctcaacgagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atgctttcaggtgacatacctccgagccaaaccatttacatcaagaatctcaacgagaag 133
Query: 61 gtcaagaaagacgagttgaagaggtctctctattgcttattctctcaatatggaaggatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gtcaagaaagacgagttgaagaggtctctctattgcttattctctcaatatggaaggatt 193
Query: 121 ttggacgttgttgctctaaagacacctaagcttcgaggacaggcatgggtttgtttcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttggacgttgttgctctaaagacacctaagcttcgaggacaggcatgggtttgtttcagt 253
Query: 181 gaagtcccttctgctagtaacgcagtgcgacaaatgcaaaacttcccgttttatgaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gaagtcccttctgctagtaacgcagtgcgacaaatgcaaaacttcccgttttatgaaaaa 313
Query: 241 cctatgcgaattcagtatgctaaaacaaagtcagattgtattgct 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cctatgcgaattcagtatgctaaaacaaagtcagattgtattgct 358
Score = 303 bits (153), Expect = 8e-82
Identities = 153/153 (100%)
Strand = Plus / Plus
Query: 365 cacagcaacctgctccggctaatggaacacatggtgcaagtaatggtggcccaactgcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cacagcaacctgctccggctaatggaacacatggtgcaagtaatggtggcccaactgcct 497
Query: 425 ccttccgtccaggagtcggtgcccaagaagcagctgctcctaacaatattttgttcattg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccttccgtccaggagtcggtgcccaagaagcagctgctcctaacaatattttgttcattg 557
Query: 485 agaatttgccttatgaaactaccggtaggatgc 517
|||||||||||||||||||||||||||||||||
Sbjct: 558 agaatttgccttatgaaactaccggtaggatgc 590
>gnl|LJGI|TC81197 similar to UniRef100_A8MRK1 Cluster: Uncharacterized protein
At1g06960.3; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At1g06960.3 - Arabidopsis
thaliana (Mouse-ear cress), partial (8%)
Length = 349
Score = 95.6 bits (48), Expect = 4e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 643 ggcttcaaaatcacccctcagaatcctatgattataacctttgctaagaagt 694
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ggcttcaaaatcacccctcagaatcctatgattataccctttgctaagaagt 52
>gnl|LJGI|AV768549 similar to UniRef100_Q41499 Cluster: Spliceosomal protein; n=1;
Solanum tuberosum|Rep: Spliceosomal protein - Solanum
tuberosum (Potato), partial (6%)
Length = 276
Score = 85.7 bits (43), Expect = 3e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 651 aatcacccctcagaatcctatgattataacctttgctaagaag 693
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aatcacccctcagaatcctatgattataacctttgctaagaag 234