Miyakogusa Predicted Gene
- Lj2g3v2353630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2353630.1 tr|G7JZQ0|G7JZQ0_MEDTR Sorting nexin-1
OS=Medicago truncatula GN=MTR_5g073280 PE=4 SV=1,85.31,0,PX
domain,Phox homologous domain; BAR/IMD domain-like,NULL; no
description,Phox homologous domain; P,CUFF.38876.1
(1779 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60555 similar to UniRef100_A7NY69 Cluster: Chromosome... 1160 0.0
gnl|LJGI|TC81678 weakly similar to UniRef100_A7NY69 Cluster: Chr... 605 e-172
gnl|LJGI|TC65395 similar to UniRef100_A7Q3Q2 Cluster: Chromosome... 119 6e-26
gnl|LJGI|TC66726 86 9e-16
gnl|LJGI|TC60842 similar to UniRef100_A7Q3Q2 Cluster: Chromosome... 60 5e-08
>gnl|LJGI|TC60555 similar to UniRef100_A7NY69 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (34%)
Length = 800
Score = 1160 bits (585), Expect = 0.0
Identities = 606/611 (99%), Gaps = 4/611 (0%)
Strand = Plus / Plus
Query: 1170 gggagagacattgggtgaattagggttggcatttattaaattgacaaaatttgagaatga 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gggagagacattgggtgaattagggttggcatttattaaattgacaaaatttgagaatga 61
Query: 1230 agaggctgtcttgaactcgcagagggtacgggctactgacatgaaa-ggtgttgcaaccg 1288
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 62 agaggctgtcttgaactcgcagagggtacgggctactgacatgaaaaggtgttgcaaccg 121
Query: 1289 ctgctgttaaagctagcagattatatcgagaattaaatgctcagactgtgaagcatttgc 1348
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctgctgttaaagctagcagattatatcgagaattaaatgctcagactgtgaagcatttg- 180
Query: 1349 aggatacgcttcatgaatatcttggattaatgttggcagttcatagtgcattctcggatc 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 --gatacgcttcatgaatatcttggattaatgttggcagttcatagtgcattctcggatc 238
Query: 1409 gttctagtgcactgttgacagtgcagactcttctatcagaactgtcttctttgcagtcaa 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gttctagtgcactgttgacagtgcagactcttctatcagaactgtcttctttgcagtcaa 298
Query: 1469 gagctgaaaaacttgaagcagcatcatctaaaatttttggaggtgacaaatcgaggattc 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gagctgaaaaacttgaagcagcatcatctaaaatttttggaggtgacaaatcgaggattc 358
Query: 1529 gtaagttagaggagctacaggaaaccataagagtcactgaagacgccaaaaacattgcaa 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtaagttagaggagctacaggaaaccataagagtcactgaagacgccaaaaacattgcaa 418
Query: 1589 ttagagaatacgagcggatcaaggaaaacaataggagtgaacttgaaagactggatagcg 1648
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ttagagaatacgagcggatcaaggaaaacaataggagtgaacttgaaagactggatagct 478
Query: 1649 agaggcaggctgacttcttaaacatgttgaaaggattcgtagttaatcaggtggggtatg 1708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agaggcaggctgacttcttaaacatgttgaaaggattcgtagttaatcaggtggggtatg 538
Query: 1709 ctgagaaaatagctaatgtctggacaaaagttgctgaagagacacgaaaatatgtgaatg 1768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctgagaaaatagctaatgtctggacaaaagttgctgaagagacacgaaaatatgtgaatg 598
Query: 1769 aaagcacttaa 1779
|||||||||||
Sbjct: 599 aaagcacttaa 609
>gnl|LJGI|TC81678 weakly similar to UniRef100_A7NY69 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 556
Score = 605 bits (305), Expect = e-172
Identities = 312/313 (99%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 1 atggtcttcttcaacctcaccatctcaaaccattacacctcggcgcacgttagcctccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 atggtcttcttcaacctcaccatctcaaaccattacacctcggcgcacgttagcctccgc 70
Query: 61 caccgacacctgccacgaacactgacactccaaacgcgatttccccttaacctacaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 caccgacacctgccacgaacactgacactccaaacgcgatttccccttaacctacaccca 130
Query: 121 ttccattccctcaccaccaccaccaacctc-gctgatcgaacaagcaacatcaccctcac 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 131 ttccattccctcaccaccaccaccaacctctgctgatcgaacaagcaacatcaccctcac 190
Query: 180 acttctccactttcccaatcccaatcgatcgaagaaatcatcaaacaatgatggactccg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 acttctccactttcccaatcccaatcgatcgaagaaatcatcaaacaatgatggactccg 250
Query: 240 agaatcatacctcggaggagcaccaccaccaccctctctccgccgccgccgcgcccagag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agaatcatacctcggaggagcaccaccaccaccctctctccgccgccgccgcgcccagag 310
Query: 300 aagaaatggaaag 312
|||||||||||||
Sbjct: 311 aagaaatggaaag 323
Score = 83.8 bits (42), Expect = 3e-15
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 313 ttctcaaaccctaactcccacgatacttcctcctacctcgccacgc 358
|||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 511 ttctcaaaccctaactcccacgatacttcctcctacctcgacacgc 556
>gnl|LJGI|TC65395 similar to UniRef100_A7Q3Q2 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 1231
Score = 119 bits (60), Expect = 6e-26
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 641 ttgtgacgctatccgatcggttatcggaggcgtatagagggtttttcattccgccgaggc 700
|||||||||| || || |||| ||||||||||| || |||| | | |||||| |||||
Sbjct: 634 ttgtgacgctgtcggagaggttgtcggaggcgtacagggggtatgtgattccggtgaggc 693
Query: 701 cggataagagcattgtggagagccaggtgatgcagaaacaggagtttgtggagcagagga 760
|||| ||||| | ||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 694 cggagaagagtactgtggagaggcaggtgatgcagaagggggagtttgtggagcagagga 753
Query: 761 gggtggcgttggagaagtat 780
| ||||||||||||||||||
Sbjct: 754 gagtggcgttggagaagtat 773
Score = 60.0 bits (30), Expect = 5e-08
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 1003 aaggagttgaagcagtctatggctaatgactggggaggttccaagccaccggttgtggag 1062
|||||||||||||||||| | | ||||| ||||| | | ||||||| |||||| |||
Sbjct: 1002 aaggagttgaagcagtctgttaccaatgattggggtgctgccaagcctttggttgttgag 1061
Query: 1063 gaagacaaggagttcctggagaagaa 1088
|||||||||||||| ||||||||||
Sbjct: 1062 gaagacaaggagtttatggagaagaa 1087
>gnl|LJGI|TC66726
Length = 670
Score = 85.7 bits (43), Expect = 9e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 908 cgaagcttcccaagcagttgctaggggagagtgtgattgccccgcacgaggttgtgcag 966
|||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 84 cgaagcttcccaagcacttgctgggggagagtgtgattgccccgcatgatgttgtgcag 142
Score = 60.0 bits (30), Expect = 5e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 989 tgatgaggttgtttaaggagttgaagcagt 1018
||||||||||||||||||||||||||||||
Sbjct: 357 tgatgaggttgtttaaggagttgaagcagt 386
>gnl|LJGI|TC60842 similar to UniRef100_A7Q3Q2 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 757
Score = 60.0 bits (30), Expect = 5e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 1606 atcaaggaaaacaataggagtgaacttgaaagactggatagcgagaggca 1655
||||||||||||||||||||||| ||||||||| | || || ||||||||
Sbjct: 394 atcaaggaaaacaataggagtgagcttgaaagaattgacagggagaggca 443