Miyakogusa Predicted Gene
- Lj2g3v2314920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2314920.1 Non Chatacterized Hit- tr|I1M061|I1M061_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51915 PE,74.57,0,GB DEF:
VPS13-LIKE PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),Vacuolar protei,CUFF.38888.1
(7776 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74894 similar to UniRef100_A2Q3V2 Cluster: TonB box, ... 916 0.0
gnl|LJGI|AV777242 similar to UniRef100_A2Q3V3 Cluster: C-5 cytos... 807 0.0
gnl|LJGI|TC72774 similar to UniRef100_A2Q3V3 Cluster: C-5 cytosi... 561 e-158
>gnl|LJGI|TC74894 similar to UniRef100_A2Q3V2 Cluster: TonB box, N-terminal; n=1;
Medicago truncatula|Rep: TonB box, N-terminal - Medicago
truncatula (Barrel medic), partial (14%)
Length = 463
Score = 916 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 786 tatattgtcttcttctgaaggattggttcttacatcatcatgggggcctcgaaattttca 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tatattgtcttcttctgaaggattggttcttacatcatcatgggggcctcgaaattttca 61
Query: 846 agattatctatggggtccctcctcagaaaatatttctcctattttaaatgtaagggttag 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agattatctatggggtccctcctcagaaaatatttctcctattttaaatgtaagggttag 121
Query: 906 gaaaccacaggacaaaccttcagctgtcgatttggaaataagcatcggcgttcagcatgt 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaaaccacaggacaaaccttcagctgtcgatttggaaataagcatcggcgttcagcatgt 181
Query: 966 gtactgcatgttaccctctgagtatctgtccatcatcattgggtacttttcattatctga 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtactgcatgttaccctctgagtatctgtccatcatcattgggtacttttcattatctga 241
Query: 1026 ttgggctggcgaatcaagtgacctgtcttcttttgaagagccaaaaaatgaaacgagcat 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttgggctggcgaatcaagtgacctgtcttcttttgaagagccaaaaaatgaaacgagcat 301
Query: 1086 tacatataaatttgaaatcttagactctgttcttattttgccagtggaaagtaatgaaca 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tacatataaatttgaaatcttagactctgttcttattttgccagtggaaagtaatgaaca 361
Query: 1146 tcagtttctgaaggttgaaataccccagctttattgtagttttgtcgagaatttgggttt 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcagtttctgaaggttgaaataccccagctttattgtagttttgtcgagaatttgggttt 421
Query: 1206 tgatgatgcattgaaggacattcctaccgagtgttttgttcc 1247
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgatgatgcattgaaggacattcctaccgagtgttttgttcc 463
>gnl|LJGI|AV777242 similar to UniRef100_A2Q3V3 Cluster: C-5 cytosine-specific DNA
methylase; Vacuolar protein sorting- associated protein;
n=1; Medicago truncatula|Rep: C-5 cytosine-specific DNA
methylase; Vacuolar protein sorting- associated protein -
Medicago truncatula (Barrel medic), partial (8%)
Length = 407
Score = 807 bits (407), Expect = 0.0
Identities = 407/407 (100%)
Strand = Plus / Plus
Query: 5707 aaaaggttatgtgatcatagccaagttaggcctgcagaatataaggagaaaatatcgatt 5766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaggttatgtgatcatagccaagttaggcctgcagaatataaggagaaaatatcgatt 60
Query: 5767 tgtattcaatatattgggatctctttgattaattcatacccacaggaattgctttttgcc 5826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtattcaatatattgggatctctttgattaattcatacccacaggaattgctttttgcc 120
Query: 5827 tgtattaaagatatagaaataaacctcctgcaaagtttggatcgccaaaggctttccatg 5886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtattaaagatatagaaataaacctcctgcaaagtttggatcgccaaaggctttccatg 180
Query: 5887 atgatatcattcatacaaattgacaaccagttgcgctctactccctatccagttttgttg 5946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgatatcattcatacaaattgacaaccagttgcgctctactccctatccagttttgttg 240
Query: 5947 tccttcaataatggatatagatcctgccaagttgacaacacaaagtcgagggatgatgtc 6006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccttcaataatggatatagatcctgccaagttgacaacacaaagtcgagggatgatgtc 300
Query: 6007 atgagaacaagaattgaaaaattaaatcagaagagtttcggaagcagctcttctactcct 6066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgagaacaagaattgaaaaattaaatcagaagagtttcggaagcagctcttctactcct 360
Query: 6067 gtgatgtgcttagaaatttcaaaatggaggaagaaagacatttcatt 6113
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgatgtgcttagaaatttcaaaatggaggaagaaagacatttcatt 407
>gnl|LJGI|TC72774 similar to UniRef100_A2Q3V3 Cluster: C-5 cytosine-specific DNA
methylase; Vacuolar protein sorting- associated protein;
n=1; Medicago truncatula|Rep: C-5 cytosine-specific DNA
methylase; Vacuolar protein sorting- associated protein -
Medicago truncatula (Barrel medic), partial (4%)
Length = 547
Score = 561 bits (283), Expect = e-158
Identities = 290/291 (99%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 7487 tacatgctgacagtg-atgatcaaggtgttttgcacattgttagtagtggaccagattcc 7545
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tacatgctgacagtggatgatcaaggtgttttgcacattgttagtagtggaccagattcc 488
Query: 7546 tcctcatttaggcaaaatcagaattctcccaagagaggcagtggtagcagaaccagggct 7605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tcctcatttaggcaaaatcagaattctcccaagagaggcagtggtagcagaaccagggct 428
Query: 7606 gtgcgtttcaaccattatccgactcatcttccacttcctcaaacaaatttagaactagct 7665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gtgcgtttcaaccattatccgactcatcttccacttcctcaaacaaatttagaactagct 368
Query: 7666 tgtgaggaagatgcagccaacttgttacagattttgttgtctgctatagagaaaggaaaa 7725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgtgaggaagatgcagccaacttgttacagattttgttgtctgctatagagaaaggaaaa 308
Query: 7726 ggtaaagcttgggattcagggaggatcttgcatcgagctaatttcaagtag 7776
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggtaaagcttgggattcagggaggatcttgcatcgagctaatttcaagtag 257