Miyakogusa Predicted Gene
- Lj2g3v2314910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2314910.1 Non Chatacterized Hit- tr|I1MBE5|I1MBE5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39258
PE,66.89,0,seg,NULL; Thioredoxin-like,Thioredoxin-like fold;
Glutaredoxin,Glutaredoxin; GLUTAREDOXIN_2,Glutared,CUFF.38829.1
(804 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75125 similar to UniRef100_A7Q3M7 Cluster: Chromosome... 749 0.0
gnl|LJGI|TC78715 similar to UniRef100_A7NYB0 Cluster: Chromosome... 678 0.0
gnl|LJGI|TC77818 similar to UniRef100_A7Q3M7 Cluster: Chromosome... 428 e-119
gnl|LJGI|DC599764 similar to UniRef100_A7NYB0 Cluster: Chromosom... 56 3e-07
>gnl|LJGI|TC75125 similar to UniRef100_A7Q3M7 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 968
Score = 749 bits (378), Expect = 0.0
Identities = 378/378 (100%)
Strand = Plus / Plus
Query: 427 ctccgcggcttccgcgtccgaatcgacgagcgggacgtgtcgatggactcagctttcacg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctccgcggcttccgcgtccgaatcgacgagcgggacgtgtcgatggactcagctttcacg 428
Query: 487 gcggagctgattcgggtgatgggtcggagcaggttgacgctgccgcgtgtgttcattgga 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gcggagctgattcgggtgatgggtcggagcaggttgacgctgccgcgtgtgttcattgga 488
Query: 547 gggaggtatgttggtggtgctgaggaggtgaggcagatgaacgaggtgggggagctgaag 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gggaggtatgttggtggtgctgaggaggtgaggcagatgaacgaggtgggggagctgaag 548
Query: 607 aagattcttaaagcgctgccggaggtggatccggcggagtgtgacgtttgcggcggtcac 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aagattcttaaagcgctgccggaggtggatccggcggagtgtgacgtttgcggcggtcac 608
Query: 667 cggtttgttctgtgtgatgagtgttatggtagcaggaaggtgtttactgagaaagctgga 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cggtttgttctgtgtgatgagtgttatggtagcaggaaggtgtttactgagaaagctgga 668
Query: 727 ttcagagtctgcattgcttgcaatgagaatggtcttgttaggtgcccttcttgttttgat 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ttcagagtctgcattgcttgcaatgagaatggtcttgttaggtgcccttcttgttttgat 728
Query: 787 gatccaattttattatga 804
||||||||||||||||||
Sbjct: 729 gatccaattttattatga 746
Score = 359 bits (181), Expect = 2e-98
Identities = 187/189 (98%)
Strand = Plus / Plus
Query: 1 atgtggcgaccgtggggcaaatccaaatcaaccactcgaattcacagtgcatcttcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atgtggcgaccgtggggcaaatccaaatcaaccactcgaattcacagtgcatcttcttca 245
Query: 61 ccttccttctcctgttcctccttcaaagacattcaaaccctttgcctcgacgaaccaccg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ccttccttctcttgttcctccttcaaagacattcaaaccctttgcctcgacgaaccaccg 305
Query: 121 ccacaaccctcccccatcagaaaatccaccgttttccaccgagtccgactcgccaactcg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 306 ccacaaccctcccccatcagaaaatccaccgttttccgccgagtccgactcgccaactcg 365
Query: 181 ctcctccgc 189
|||||||||
Sbjct: 366 ctcctccgc 374
>gnl|LJGI|TC78715 similar to UniRef100_A7NYB0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 663
Score = 678 bits (342), Expect = 0.0
Identities = 386/408 (94%)
Strand = Plus / Plus
Query: 1 atgtggcgaccgtggggcaaatccaaatcaaccactcgaattcacagtgcatcttcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atgtggcgaccgtggggcaaatccaaatcaaccactcgaattcacagtgcatcttcttca 315
Query: 61 ccttccttctcctgttcctccttcaaagacattcaaaccctttgcctcgacgaaccaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ccttccttctcctgttcctccttcaaagacattcaaaccctttgcctcgacgaaccaccg 375
Query: 121 ccacaaccctcccccatcagaaaatccaccgttttccaccgagtccgactcgccaactcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccacaaccctcccccatcagaaaatccaccgttttccaccgagtccgactcgccaactcg 435
Query: 181 ctcctccgcacctggtcaactcactcccaaaaccagaaccaccaccacnnnnnnnnnnnn 240
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctcctccgcacctggtcaactcactcccaaaaccagaaccaccaccaccaacaacaacaa 495
Query: 241 nnnnnnnnnncgaagctacccagaaccctctcctacccagatgactcgttacctgacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 caacaacaaccgaagctacccagaaccctctcctacccagatgactcgttacctgacctt 555
Query: 301 ccaccttctccctctccggcgccggagatttaccttccgggtacagagaatcgtgtggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccaccttctccctctccggcgccggagatttaccttccgggtacagagaatcgtgtggtg 615
Query: 361 gtgtacttcacgagcctgcgcgtggtgaggccgacattcgagggctgc 408
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtgtacttcacgagcctgcgcgtggtgaggccgacattcgagggctgc 663
>gnl|LJGI|TC77818 similar to UniRef100_A7Q3M7 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 530
Score = 428 bits (216), Expect = e-119
Identities = 222/224 (99%)
Strand = Plus / Plus
Query: 574 gtgaggcagatgaacgaggtgggggagctgaagaagattcttaaagcgctgccggaggtg 633
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaggcagatgcacgaggtgggggaggtgaagaagattcttaaagcgctgccggaggtg 60
Query: 634 gatccggcggagtgtgacgtttgcggcggtcaccggtttgttctgtgtgatgagtgttat 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatccggcggagtgtgacgtttgcggcggtcaccggtttgttctgtgtgatgagtgttat 120
Query: 694 ggtagcaggaaggtgtttactgagaaagctggattcagagtctgcattgcttgcaatgag 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtagcaggaaggtgtttactgagaaagctggattcagagtctgcattgcttgcaatgag 180
Query: 754 aatggtcttgttaggtgcccttcttgttttgatgatccaatttt 797
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatggtcttgttaggtgcccttcttgttttgatgatccaatttt 224
>gnl|LJGI|DC599764 similar to UniRef100_A7NYB0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 577
Score = 56.0 bits (28), Expect = 3e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 152 ttttccaccgagtccgactcgccaactcgctcctccgcacctggtcaactca 203
|||||||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 358 ttttccaccgagtcacgctcgccaactcgctcctccgagcctgggcaactca 409