Miyakogusa Predicted Gene
- Lj2g3v2314890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2314890.1 Non Chatacterized Hit- tr|I1JHF7|I1JHF7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.49,0,seg,NULL;
PREDICTED PROTEIN (FRAGMENT),NULL; TETRATRICOPEPTIDE REPEAT PROTEIN,
TPR,NULL; coiled-coil,CUFF.38832.1
(2280 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS362145 similar to UniRef100_A7NYB1 Cluster: Chromosom... 474 e-132
gnl|LJGI|TC80479 similar to UniRef100_A7NYB1 Cluster: Chromosome... 262 9e-69
gnl|LJGI|TC67899 similar to UniRef100_O65020 Cluster: Ethylene-o... 88 3e-16
>gnl|LJGI|FS362145 similar to UniRef100_A7NYB1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 780
Score = 474 bits (239), Expect = e-132
Identities = 599/719 (83%)
Strand = Plus / Minus
Query: 251 ttgcagagtccaaaatgaggaagattgatttcacccaaaatgggatatgcccaaagggta 310
||||||||||| ||||| |||||||||||||| | |||||||||| |||| |||| |
Sbjct: 780 ttgcagagtcccaaatggggaagattgatttctcaggaaatgggataaccccagagggaa 721
Query: 311 tgagagcagtggaattatacagcagggtaaaaagattggaacttttctgccccatgactg 370
||| ||||||||||| ||||||||| ||||||||||| ||| ||| ||||||||||
Sbjct: 720 tgaaggcagtggaattttacagcaggaccaaaagattggaccttctctctcccatgactg 661
Query: 371 ttttggagcttctttcatttgccaataggttctgttgtgaggagatgaagtctgcttgtg 430
||||||||||| | || |||||||||||||| ||||||||||| ||||||||| | ||||
Sbjct: 660 ttttggagcttttgtcctttgccaataggttttgttgtgaggaaatgaagtcttcctgtg 601
Query: 431 aggcccatttggcttcaactgtagtgaatgtggatgatgcattggcacttgttgagtatg 490
| |||||||||||||||| ||| || ||| | || |||||||||| |||| |||||||||
Sbjct: 600 atgcccatttggcttcaattgttgtaaatattgaagatgcattggtacttattgagtatg 541
Query: 491 gattggaagagaaagcacctcttcttgtagcttcatgcttacaagtgcttctcagggagc 550
|||||||||||| ||| |||||||||||| || |||||||| || | || || ||||
Sbjct: 540 gattggaagagagagccactcttcttgtaggctcttgcttacagatgatgctaagagagc 481
Query: 551 tgccaaattctttgtataactcaaaagtgataaaaatcttctgtagtcccgagggaaaga 610
| || |||||| ||||||| |||||||| ||||| | ||||||||| | |||| ||||
Sbjct: 480 ttcctaattctctgtataatccaaaagtggtaaaattgttctgtagttctgaggcaaagg 421
Query: 611 aaaggttagaaactatggggtatgattctttcttactctactatttcctgagccaggttt 670
||||||| | | |||||| || |||||||||| | |||||||||||||||||||||
Sbjct: 420 aaaggttggctatggtggggtgtgcttctttcttattatactatttcctgagccaggttg 361
Query: 671 ctatggaggaaaacatggtatctaagactacaatgatgttactagaaagacttggggagt 730
|||||||||||| |||||| ||||| ||||||||||||||| | || ||| | |||||||
Sbjct: 360 ctatggaggaaagcatggtttctaaaactacaatgatgttattggagagattaggggagt 301
Query: 731 gtgcagctgaaaattggcagaaagcacttgcattccatcaattggggtgtgtgaatcttg 790
|||| ||||| ||||||||||| ||||| || |||||||||||||||||| ||||
Sbjct: 300 gtgctagagaaaagtggcagaaagcccttgcttttcatcaattggggtgtgtgttacttg 241
Query: 791 aaaggaaagaataccaagatgctagacattattttgaagttgcagctgaagcaggtcatg 850
||||||||||||| |||||||| |||| |||||| | |||| ||| ||||||||||
Sbjct: 240 aaaggaaagaatataaagatgctcagcattgttttgaggaagcagttgaggcaggtcatg 181
Query: 851 tgtattctttggctggtatagccagaacaaagtataaacaaaatcaaccatgttcagcct 910
| ||||| |||||||| | |||||||| ||| | || || |||||| | |||||| |
Sbjct: 180 tttattccatggctggtgtggccagaaccaagcacaagcagggtcaaccttattcagctt 121
Query: 911 ataagttaatcagttctctcatatttgagcataaacctgctgggtggatgtaccaggag 969
|||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||
Sbjct: 120 ataagttaattagttctctcatatttgagtataaaccagctgggtggatgtatcaggag 62
>gnl|LJGI|TC80479 similar to UniRef100_A7NYB1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 669
Score = 262 bits (132), Expect = 9e-69
Identities = 231/264 (87%)
Strand = Plus / Plus
Query: 1993 gatcttgatttagcaacacaacttgatcctttaaggacatatccatatagattcagggca 2052
||||||||| | ||||||||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 6 gatcttgatgttgcaacacaacttgatcctttaaggacatacccttatagatacagggca 65
Query: 2053 gcagtgctgatggatgagcaaaaagaaactgaagctgtggaagagatcaccaaggccata 2112
|||||| |||||||||||||||| |||||||||||||| || || |||| |||||||||
Sbjct: 66 gcagtgatgatggatgagcaaaaggaaactgaagctgtagaggaactcacaaaggccata 125
Query: 2113 aacttcaagcttgacatgaaaatacttcatctacgagcagcgttttacgagtcaatgggg 2172
|| ||||||| |||| || |||| |||||||| |||||||| |||||||||||||||||
Sbjct: 126 aaattcaagcctgacgtgcaaatgcttcatctgcgagcagcattttacgagtcaatggga 185
Query: 2173 gacatatcctcttctcttcaagactgtcaggcagctctatgcttagatcctaaccataca 2232
||| |||||||| || | |||||||||||||||||||| |||||||| || |||||| |
Sbjct: 186 gacctatcctctgctatccaagactgtcaggcagctctttgcttagaccccaaccatgct 245
Query: 2233 gaaacacttgatttgtatcaaagg 2256
| |||||||| |||||||||||
Sbjct: 246 ggcacacttgacctgtatcaaagg 269
>gnl|LJGI|TC67899 similar to UniRef100_O65020 Cluster: Ethylene-overproduction protein
1; n=1; Arabidopsis thaliana|Rep: Ethylene-overproduction
protein 1 - Arabidopsis thaliana (Mouse-ear cress),
partial (28%)
Length = 1393
Score = 87.7 bits (44), Expect = 3e-16
Identities = 152/188 (80%)
Strand = Plus / Plus
Query: 1867 tatcatcagaaaaatcaacgaaaagccgcgtatgatgagatgacgaagctaattgagaag 1926
||||||| ||||||||||| ||||| || |||||||||||||| || |||||||| |||
Sbjct: 437 tatcatcttaaaaatcaacgcaaagctgcatatgatgagatgacaaaactaattgaaaag 496
Query: 1927 gctgagagcaatgcctcagcgtatgagaaacgatctgaatactgtgaccgcgagatggcg 1986
|| || ||||| || || | ||||||||| || ||||| ||||||||||| |||||
Sbjct: 497 gcctggaataatgcatcggcttttgagaaacggtcagaatattgtgaccgcgatatggca 556
Query: 1987 aaggctgatcttgatttagcaacacaacttgatcctttaaggacatatccatatagattc 2046
||| ||||||| | | |||||||| | |||||| ||||||||||||| || ||||
Sbjct: 557 aagagtgatcttagtatggcaacacagttggatcctctaaggacatatccttacagatat 616
Query: 2047 agggcagc 2054
||||||||
Sbjct: 617 agggcagc 624