Miyakogusa Predicted Gene
- Lj2g3v2279590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2279590.1 Non Chatacterized Hit- tr|K4CQ49|K4CQ49_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,71.67,1e-16,CXXU_selWTH: selT/selW/selH selenoprotein
domain,Selenoprotein, Rdx type; Rdx,Selenoprotein, Rdx
typ,CUFF.38791.1
(678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64143 similar to UniRef100_A7QHQ1 Cluster: Chromosome... 1344 0.0
gnl|LJGI|GO032372 similar to UniRef100_UPI00005DC179 Cluster: se... 563 e-160
gnl|LJGI|AV774128 similar to UniRef100_A7QHQ1 Cluster: Chromosom... 246 2e-64
>gnl|LJGI|TC64143 similar to UniRef100_A7QHQ1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 1094
Score = 1344 bits (678), Expect = 0.0
Identities = 678/678 (100%)
Strand = Plus / Plus
Query: 1 atggatcgcactcagcttctgttgctcggtttacctctcttcctcttctgttctgacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atggatcgcactcagcttctgttgctcggtttacctctcttcctcttctgttctgacctc 184
Query: 61 ctgtctctcttcacatctccgccgccacctccgacgaaaccatctcacagccaccaccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ctgtctctcttcacatctccgccgccacctccgacgaaaccatctcacagccaccaccac 244
Query: 121 gaacaaccagcggttaaccctgcaacaattcagttcccctccgagaaaaccgccaccaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gaacaaccagcggttaaccctgcaacaattcagttcccctccgagaaaaccgccaccaat 304
Query: 181 attggaggtgttggtcttggcaacactgtcaacatcaactactgttcttcttgctcctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 attggaggtgttggtcttggcaacactgtcaacatcaactactgttcttcttgctcctac 364
Query: 241 aagggaacagcggtaacaatgaagaatatgttggagattgcttttcctggaactgaggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aagggaacagcggtaacaatgaagaatatgttggagattgcttttcctggaactgaggtt 424
Query: 301 gttcttgcaaattatcccgcgccacttccaaagcgtctgttaagcaaagtggttcctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gttcttgcaaattatcccgcgccacttccaaagcgtctgttaagcaaagtggttcctgtt 484
Query: 361 gttcagcttggtgttatagggactgtagtagctggggaacagatttttccaatgatgggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gttcagcttggtgttatagggactgtagtagctggggaacagatttttccaatgatgggt 544
Query: 421 tttgttgcacctcctccttggtatttcaacttgcgtgctaacaagtttggaaccattgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tttgttgcacctcctccttggtatttcaacttgcgtgctaacaagtttggaaccattgcc 604
Query: 481 actacttggcttcttgggaatacactgcagtcgttcttacaaagctctggggcatttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 actacttggcttcttgggaatacactgcagtcgttcttacaaagctctggggcatttgaa 664
Query: 541 gtttacttgaatggtgaactggtgttctctaaactgaaggaggcaaggtttcctggagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gtttacttgaatggtgaactggtgttctctaaactgaaggaggcaaggtttcctggagag 724
Query: 601 atagagttgaaggatctgatcagcaaaaagatggagacatctagacttgtccatagcgcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 atagagttgaaggatctgatcagcaaaaagatggagacatctagacttgtccatagcgcg 784
Query: 661 tcagaattgaatctttag 678
||||||||||||||||||
Sbjct: 785 tcagaattgaatctttag 802
>gnl|LJGI|GO032372 similar to UniRef100_UPI00005DC179 Cluster: selenium binding; n=1;
Arabidopsis thaliana|Rep: selenium binding - Arabidopsis
thaliana, partial (38%)
Length = 412
Score = 563 bits (284), Expect = e-160
Identities = 287/288 (99%)
Strand = Plus / Plus
Query: 99 accatctcacagccaccaccacgaacaaccagcggttaaccctgcaacaattcagttccc 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 accatctcacagccaccaccacgaacaaccagcggttaaccctgcaacaattcagttccc 184
Query: 159 ctccgagaaaaccgccaccaatattggaggtgttggtcttggcaacactgtcaacatcaa 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ctccgagaaaaccgccaccaatattggaggtgttggtcttggcaacactgtcaacatcaa 244
Query: 219 ctactgttcttcttgctcctacaagggaacagcggtaacaatgaagaatatgttggagat 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctactgttcttcttgctcctacaagggaacagcggtaacaatgaagaatatgttggagat 304
Query: 279 tgcttttcctggaactgaggttgttcttgcaaattatcccgcgccacttccaaagcgtct 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgcttttcctggaactgaggttgttcttgcaaattatcccgcgccacttccaaagcgtct 364
Query: 339 gttaagcaaagtggttcctgttgttcagcttggtgttatagggactgt 386
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 365 gttaagcaaagtggttcctgttgttcagcttggtgttataaggactgt 412
Score = 147 bits (74), Expect = 1e-34
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 atggatcgcactcagcttctgttgctcggtttacctctcttcctcttctgttctgacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atggatcgcactcagcttctgttgctcggtttacctctcttcctcttctgttctgacctc 112
Query: 61 ctgtctctcttcac 74
||||||||||||||
Sbjct: 113 ctgtctctcttcac 126
>gnl|LJGI|AV774128 similar to UniRef100_A7QHQ1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 457
Score = 246 bits (124), Expect = 2e-64
Identities = 130/132 (98%)
Strand = Plus / Minus
Query: 547 ttgaatggtgaactggtgttctctaaactgaaggaggcaaggtttcctggagagatagag 606
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 457 ttgaatggtgaactggtgttctctaaattgaaggaggcaaggtttcctggagagatagag 398
Query: 607 ttgaaggatctgatcagcaaaaagatggagacatctagacttgtccatagcgcgtcagaa 666
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttgaaggatctgatcagccaaaagatggagacatctagacttgtccatagcgcgtcagaa 338
Query: 667 ttgaatctttag 678
||||||||||||
Sbjct: 337 ttgaatctttag 326