Miyakogusa Predicted Gene

Lj2g3v2279570.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2279570.2 Non Chatacterized Hit- tr|F6I782|F6I782_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,59.09,0.00000000000004, ,CUFF.38790.2
         (762 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78411 similar to UniRef100_Q0E179 Cluster: Os02g04785...  1479   0.0  

>gnl|LJGI|TC78411 similar to UniRef100_Q0E179 Cluster: Os02g0478500 protein; n=1;
           Oryza sativa Japonica Group|Rep: Os02g0478500 protein -
           Oryza sativa subsp. japonica (Rice), partial (7%)
          Length = 994

 Score = 1479 bits (746), Expect = 0.0
 Identities = 758/762 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctctctctagcgaaacggctccagaccttgaaaccctttctcgttcgcgggccccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 29  atgctctctctagcgaaacggctccagaccttgaaaccctttctcgttcgcgggccccac 88

                                                                       
Query: 61  catctccgtaatgctcgaaccgacaccggccactccaggcgccgcccaaagtcgccgctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  catctccgtaatgctcgaaccgacaccggccactccaggcgccgcccaaagtcgccgctg 148

                                                                       
Query: 121 ctggcgcttaagaagccggaggagaagtcggagtggtgggccgtcgacggcgaaatgcac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ctggcgcttaagaagccggaggagaagtcggagtggtgggccgtcgacggcgaaatgcac 208

                                                                       
Query: 181 gagattggcgataatgtgccgctacgtgagcgtttcgtcatcccccgagagaacatcccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gagattggcgataatgtgccgctacgtgagcgtttcgtcatcccccgagagaacatcccc 268

                                                                       
Query: 241 aacaaacgccgcaagcagctgagggaacagttcatgcgcaggacccgcctcgttcttaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aacaaacgccgcaagcagctgagggaacagttcatgcgcaggacccgcctcgttcttaag 328

                                                                       
Query: 301 gaatcggaacacgatccgtggtgcaaaaggtatatggaactttataatgaacttcgagaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gaatcggaacacgatccgtggtgcaaaaggtatatggaactttataatgaacttcgagaa 388

                                                                       
Query: 361 aattgggagagactttactgggatgagggcttctctaaaaagcttgctcaggatcatgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aattgggagagactttactgggatgagggcttctctaaaaagcttgctcaggatcatgca 448

                                                                       
Query: 421 aactatgagtctgctgaagaagatgatgaagatttctccccatacaggaatagaaggtcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aactatgagtctgctgaagaagatgatgaagatttctccccatacaggaatagaaggtcc 508

                                                                       
Query: 481 cagatggagcatagtaaggacctgaattttgtaagaagcagacaatctgataccggggac 540
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 509 cagatggagcatagtaaggacctgaattttgtaagaagcagacaatttgataccggggac 568

                                                                       
Query: 541 cagaattttgggagaagcagacaatctgatacctgggagaaagttaaccttattcgtgat 600
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 569 cagaattttgggagaagcagacaatttgatacctgggagaaagttaaccttattcgtgat 628

                                                                       
Query: 601 aagtttgagtatgacagagatagaagattgagagagaaagcatttgctcccatgcatgga 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aagtttgagtatgacagagatagaagattgagagagaaagcatttgctcccatgcatgga 688

                                                                       
Query: 661 ggaactgtgcctgactctcatgattcagacttctggaaccaaccactaaatactgatcga 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ggaactgtgcctgactctcatgattcagacttctggaaccaaccactaaatactgatcga 748

                                                     
Query: 721 tattttagccaaacagaaagggatctaggggagaataaatga 762
           |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 749 tattttagccaaacagaaagggatttaggggagaataaatga 790