Miyakogusa Predicted Gene

Lj2g3v2278540.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2278540.1 Non Chatacterized Hit- tr|C5YWL6|C5YWL6_SORBI
Putative uncharacterized protein Sb09g030130
OS=Sorghu,22.95,3e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PPR_2,Pentatricopeptide repeat; PPR,Penta,CUFF.38787.1
         (1821 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73697                                                      127   3e-28

>gnl|LJGI|TC73697 
          Length = 486

 Score =  127 bits (64), Expect = 3e-28
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                       
Query: 517 ctcttttatgacatggtgcggcatggtttcttgcctgatgagtttttgcttccgaagatc 576
           |||||||||||| ||||||  | ||||||||||||||||||| |||||||| ||||||||
Sbjct: 131 ctcttttatgacctggtgccacctggtttcttgcctgatgagcttttgctttcgaagatc 190

                                                   
Query: 577 ttgcaagcgtgcgggaagtgcggggatttggagaccggga 616
           |||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 191 ttgccagcgtgagggaagtgccgggatttggagaccggga 230