Miyakogusa Predicted Gene
- Lj2g3v2277520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2277520.1 tr|Q76EX8|Q76EX8_SOYBN Microsomal omega-3 fatty
acid desaturase OS=Glycine max GN=Fan PE=2 SV=1,80.71,0,seg,NULL;
FA_desaturase,Fatty acid desaturase, type 1; DUF3474,Protein of
unknown function DUF3474; ,CUFF.38784.1
(1296 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP033409 similar to UniRef100_Q84X83 Cluster: Microsoma... 561 e-159
gnl|LJGI|TC58118 similar to UniRef100_Q9FXK9 Cluster: Microsomal... 541 e-153
gnl|LJGI|TC74827 similar to UniRef100_Q9FXK9 Cluster: Microsomal... 272 5e-72
gnl|LJGI|TC60877 similar to UniRef100_Q8LK94 Cluster: Chloroplas... 94 3e-18
gnl|LJGI|FS344951 weakly similar to UniRef100_Q708X5 Cluster: Le... 74 2e-12
>gnl|LJGI|BP033409 similar to UniRef100_Q84X83 Cluster: Microsomal omega-3-fatty acid
desaturase; n=2; Glycine max|Rep: Microsomal
omega-3-fatty acid desaturase - Glycine max (Soybean),
partial (24%)
Length = 480
Score = 561 bits (283), Expect = e-159
Identities = 283/283 (100%)
Strand = Plus / Minus
Query: 1014 ggatcgtgactatggttgggttaataacattcaccatgacattggcacacatgttattca 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggatcgtgactatggttgggttaataacattcaccatgacattggcacacatgttattca 421
Query: 1074 tcaccttttccctcaaatgcctcattatcatttggttgaagcgacccaagcagcaaaacc 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tcaccttttccctcaaatgcctcattatcatttggttgaagcgacccaagcagcaaaacc 361
Query: 1134 agttttgggagaatattatcgtgaacctgaaaaatctgcaccaattccattccatctgat 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agttttgggagaatattatcgtgaacctgaaaaatctgcaccaattccattccatctgat 301
Query: 1194 caagtacttaatactgagctttagagtagaccactttgttagtgacactggagatattgt 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 caagtacttaatactgagctttagagtagaccactttgttagtgacactggagatattgt 241
Query: 1254 ctactatcagcatgatcctcacctctaccacaagacagagtga 1296
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctactatcagcatgatcctcacctctaccacaagacagagtga 198
>gnl|LJGI|TC58118 similar to UniRef100_Q9FXK9 Cluster: Microsomal omega-3 fatty acid
desaturase; n=3; Glycine max|Rep: Microsomal omega-3
fatty acid desaturase - Glycine max (Soybean), partial
(90%)
Length = 1165
Score = 541 bits (273), Expect = e-153
Identities = 803/977 (82%), Gaps = 2/977 (0%)
Strand = Plus / Plus
Query: 227 attttgatcccagtgctcctccaccattcaagattgcagaaattagagctgcaattccaa 286
|||||||||| |||||||||||||| |||||||||| |||||| ||||| || ||||| |
Sbjct: 173 attttgatccaagtgctcctccaccgttcaagattggagaaatcagagcagccattccca 232
Query: 287 agcattgctgggtcaagaatccatggagatccctcagttatgtgctcagagatgtcatag 346
| ||||||||||| |||||||||||||| || || |||||||| ||||| |||||| | |
Sbjct: 233 aacattgctgggtgaagaatccatggaggtctctgagttatgttctcagggatgtcttgg 292
Query: 347 tagttattgcacttatagtagcagcaattcactttgatagctggtttttctggcccctct 406
| || | ||| | | |||||| ||||||| ||| |||| | |||||||| ||||
Sbjct: 293 ttgtaacagcattgggggctgcagcacttcacttcaataactggctcttctggccactct 352
Query: 407 actggattcttcagggcacaatgttctgggctctgtttgttcttggacatgattgtggcc 466
||||| | ||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 353 actgggctgctcagggcacaatgttctgggcactttttgttcttggacatgattgtggcc 412
Query: 467 atggaagcttttcagatagtcccacattgaacagcttggtgggacacattttgcactcct 526
|||||||||||||||| |||| || | || || ||||||| ||||| |||||||||
Sbjct: 413 atggaagcttttcagacagtctcatgctcaatagtgtggtgggccacatcctgcactcct 472
Query: 527 caattcttgtaccattccatggatggagaattagccatagaacccaccatcaaaaccatg 586
||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 473 ttattcttgtaccataccatggatggagaattagccacagaactcaccatcaaaaccatg 532
Query: 587 gacatgttgagaaggatgagtcatgggttccattgacagagaagatttacaagagtctag 646
||||||||||||| ||||| ||||||||||| ||||||||||||||||||| | |||||
Sbjct: 533 gacatgttgagaaagatgaatcatgggttcctatgacagagaagatttacaaaaatctag 592
Query: 647 acagcttgacaagattcatgagattcactgtgccttttcctatgtttgtgtatcccattt 706
|||| ||||| | | |||||||| | | |||||||| || |||| || || |||
Sbjct: 593 acagtgcgacaaaaaccctgagattctcctttccttttccaatctttgcatacccatttt 652
Query: 707 atttgtggacaagaagccctgggaaagaaggctcacacttcaatccgtatagcaatctgt 766
||||||||| ||||||||||| |||||||| || || ||||| || | ||||| ||||
Sbjct: 653 atttgtggaacagaagccctggaaaagaagggtctcatttcaacccattcagcaaactgt 712
Query: 767 tcacacctagtgagagaaaagaagtggcaatttcaacattgtgttgggttatcatgcttt 826
|||| || ||||| |||| ||| ||| | |||||| | |||||| |||||| | |
Sbjct: 713 tcaccccaagtgacagaagagacgtgttcacttcaactctttgttggtccatcatgttct 772
Query: 827 ctctccttctctatctgtcttccataactagtcc-tcttctaatgctcaaagtctatggt 885
| ||||||| ||| || | ||||| |||| |||| || || ||| | |||||
Sbjct: 773 gtgcacttctctgtctatccttcataatgggtccatctttta-tgttcatgctatatgga 831
Query: 886 gttccatatatgatctttgttatgtggctggactttgttacatatttgcatcaccatggc 945
|||| ||| ||||||| || | ||| ||||||| || ||||| ||||||||||||||
Sbjct: 832 attccctatttgatcttcgtggtctggttggacttcgtgacatacttgcatcaccatggt 891
Query: 946 tacaagcagaaactaccatggtaccgcggcaaggaatggagttatctaagaggtgggctt 1005
||||||||||| ||||| |||||||| |||||||||||| |||||| || ||||| |||
Sbjct: 892 tacaagcagaagctaccttggtaccgtggcaaggaatgggattatcttaggggtggtctt 951
Query: 1006 acaacagtggatcgtgactatggttgggttaataacattcaccatgacattggcacacat 1065
||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 952 acaaccgttgatcgtgactatggttgggttaacaacattcaccatgacattggcacacat 1011
Query: 1066 gttattcatcaccttttccctcaaatgcctcattatcatttggttgaagcgacccaagca 1125
||||||||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 1012 gttattcatcatcttttccctcaaattcctcactatcatttggtagaagcgacacaagca 1071
Query: 1126 gcaaaaccagttttgggagaatattatcgtgaacctgaaaaatctgcaccaattccattc 1185
||||| ||||| | ||| | ||||| || || || || ||||||| ||| | ||| ||
Sbjct: 1072 gcaaagccagtgcttggaaagtattaccgagagccagagaaatctgggccattcccactc 1131
Query: 1186 catctgatcaagtactt 1202
||||| |||||||||||
Sbjct: 1132 catctaatcaagtactt 1148
>gnl|LJGI|TC74827 similar to UniRef100_Q9FXK9 Cluster: Microsomal omega-3 fatty acid
desaturase; n=3; Glycine max|Rep: Microsomal omega-3
fatty acid desaturase - Glycine max (Soybean), partial
(40%)
Length = 622
Score = 272 bits (137), Expect = 5e-72
Identities = 251/289 (86%)
Strand = Plus / Plus
Query: 914 tggactttgttacatatttgcatcaccatggctacaagcagaaactaccatggtaccgcg 973
||||||| || ||||| |||||||||||||| ||| ||||||| ||||| |||||||| |
Sbjct: 84 tggacttcgtgacatacttgcatcaccatggttacgagcagaagctaccttggtaccgtg 143
Query: 974 gcaaggaatggagttatctaagaggtgggcttacaacagtggatcgtgactatggttggg 1033
||||||||||| |||||| || ||||| |||||||| || |||||||||||||||||||
Sbjct: 144 gcaaggaatgggattatcttaggggtggtcttacaaccgttgatcgtgactatggttggg 203
Query: 1034 ttaataacattcaccatgacattggcacacatgttattcatcaccttttccctcaaatgc 1093
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 204 ttaacaacattcaccatgacattggcacacatgttattcatcatcttttccctcaaattc 263
Query: 1094 ctcattatcatttggttgaagcgacccaagcagcaaaaccagttttgggagaatattatc 1153
|||| ||||||||||| |||||||| ||||||||||| ||||| | ||| | ||||| |
Sbjct: 264 ctcactatcatttggtagaagcgacacaagcagcaaagccagtgcttggaaagtattacc 323
Query: 1154 gtgaacctgaaaaatctgcaccaattccattccatctgatcaagtactt 1202
| || || || ||||||| ||| | ||| ||||||| |||||||||||
Sbjct: 324 gagagccagagaaatctgggccattcccactccatctaatcaagtactt 372
>gnl|LJGI|TC60877 similar to UniRef100_Q8LK94 Cluster: Chloroplast omega-3 desaturase;
n=1; Prunus persica|Rep: Chloroplast omega-3 desaturase -
Prunus persica (Peach), partial (30%)
Length = 746
Score = 93.7 bits (47), Expect = 3e-18
Identities = 155/191 (81%)
Strand = Plus / Plus
Query: 901 tttgttatgtggctggactttgttacatatttgcatcaccatggctacaagcagaaacta 960
|||||||||||| |||| || || || || |||||||| |||||| | | | ||| ||
Sbjct: 13 tttgttatgtggttggatttggtgacttacttgcatcatcatggccatgaagacaaatta 72
Query: 961 ccatggtaccgcggcaaggaatggagttatctaagaggtgggcttacaacagtggatcgt 1020
|||||||| || || ||||||||||| || || || |||||||||||||| | ||||||
Sbjct: 73 ccatggtatcgtggaaaggaatggagctaccttaggggtgggcttacaactattgatcgt 132
Query: 1021 gactatggttgggttaataacattcaccatgacattggcacacatgttattcatcacctt 1080
|||||||| | | |||| ||||| |||||||||||||| || ||||| || ||||| ||
Sbjct: 133 gactatggattgattaacaacatccaccatgacattggaacccatgtcatccatcatctc 192
Query: 1081 ttccctcaaat 1091
|| ||||||||
Sbjct: 193 tttcctcaaat 203
>gnl|LJGI|FS344951 weakly similar to UniRef100_Q708X5 Cluster: Leucine rich repeat
protein precursor; n=1; Cicer arietinum|Rep: Leucine
rich repeat protein precursor - Cicer arietinum
(Chickpea) (Garbanzo), partial (12%)
Length = 759
Score = 73.8 bits (37), Expect = 2e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 18 gtggatctgggtaaaaatacaaactttgatgttggtggaaggagatcgaagccaaac 74
||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||
Sbjct: 620 gtggatctgggaaaaaattaaaactttgattttggtggaaggagatggaagccaaac 676