Miyakogusa Predicted Gene

Lj2g3v2256310.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2256310.1 tr|G7KE48|G7KE48_MEDTR Pleiotropic drug
resistance ABC transporter family protein OS=Medicago
trunca,81.55,0,ABC_TRANSPORTER_2,ABC transporter-like; P-loop
containing nucleoside triphosphate hydrolases,NULL; A,CUFF.38774.1
         (3762 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable ...   246   9e-64
gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosom...    72   3e-11
gnl|LJGI|DC597581 similar to UniRef100_Q5W274 Cluster: Pleiotrop...    56   2e-06
gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome...    54   7e-06

>gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable pleiotropic drug
            resistance protein 3; n=1; Arabidopsis thaliana|Rep:
            Probable pleiotropic drug resistance protein 3 -
            Arabidopsis thaliana (Mouse-ear cress), partial (9%)
          Length = 424

 Score =  246 bits (124), Expect = 9e-64
 Identities = 304/364 (83%)
 Strand = Plus / Minus

                                                                        
Query: 1909 ggaatgattcttccctttcaaccattgacaatgacattccataatgtcagttattttgtt 1968
            |||||||||||||| ||||||| ||| ||  |||||||||| ||||||| ||| | ||||
Sbjct: 375  ggaatgattcttccgtttcaacaatttacggtgacattccacaatgtcaattactatgtt 316

                                                                        
Query: 1969 gacatgccgcaggaaataagaaagcaaggaatacctgaaactagattgcagctcttgtca 2028
            || ||||| || || ||||| || ||||| |||   ||||| |  ||| | |||||||||
Sbjct: 315  gatatgccacaagagataaggaaacaaggcataatagaaacgaagttgaaactcttgtca 256

                                                                        
Query: 2029 aatgtgagcggggttttctcaccgggtgttcttacagcattagtggggtctagtggggct 2088
            ||||| || ||||||||  |||| ||||| || ||||||||| ||||||| ||||| |||
Sbjct: 255  aatgttagtggggtttttgcaccaggtgtactaacagcattaatggggtcaagtggagct 196

                                                                        
Query: 2089 ggaaagaccactttgatggatgtacttgcaggcagaaaaactggagggtatatcgaaggg 2148
            |||||||| ||||| |||||||| ||||| || |||||||||||||| ||||| || || 
Sbjct: 195  ggaaagacaactttaatggatgttcttgctggaagaaaaactggaggatatattgagggt 136

                                                                        
Query: 2149 gacatcaaaatatctggttacccgaaagagcaacgaacatttgccagaatatcaggatat 2208
            || || |||||||||||||| || ||||  ||||  |||||||||||| || ||||||||
Sbjct: 135  gatattaaaatatctggttatccaaaagtacaacacacatttgccagagtagcaggatat 76

                                                                        
Query: 2209 gttgaacaaaatgatatacattctcctcaagtaacgattgaggaatcgctgtggttttct 2268
            |||||||||||||| ||||||||||||||||| ||  ||||||| || |||| |||||||
Sbjct: 75   gttgaacaaaatgacatacattctcctcaagtcacagttgaggagtccctgttgttttct 16

                
Query: 2269 gcat 2272
            ||||
Sbjct: 15   gcat 12


>gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr9 scaffold_7, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (27%)
          Length = 461

 Score = 71.9 bits (36), Expect = 3e-11
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2500 gcagctatagttatgcgagctgttcgtaacactgttgatactggaagaactgtggtttgc 2559
            |||||||| |||||| | |||||  | |||||||| |||||||||||||| || ||||||
Sbjct: 46   gcagctattgttatgagggctgtcagaaacactgtggatactggaagaacagttgtttgc 105

                                                        
Query: 2560 actatacatcagccaagtatagatatatttgaagcatttgatga 2603
            || || || ||||| || || ||||| |||||||| ||||||||
Sbjct: 106  acgattcaccagcctagcattgatatctttgaagcctttgatga 149


>gnl|LJGI|DC597581 similar to UniRef100_Q5W274 Cluster: Pleiotropic drug resistance
           protein 3; n=1; Nicotiana tabacum|Rep: Pleiotropic drug
           resistance protein 3 - Nicotiana tabacum (Common
           tobacco), partial (8%)
          Length = 448

 Score = 56.0 bits (28), Expect = 2e-06
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 607 ctccttcagccagctcctgaaacatttgagctatttgatgatct 650
           |||||||| ||||| || ||||| ||||||||||||||||||||
Sbjct: 123 ctccttcaaccagcaccggaaacctttgagctatttgatgatct 166


>gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome chr14 scaffold_27,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_27, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (80%)
          Length = 1481

 Score = 54.0 bits (27), Expect = 7e-06
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 2557 tgcactatacatcagccaagtatagatatatttgaagcatttgatga 2603
            |||||||| || || |||||||| ||||||||||| |||||||||||
Sbjct: 167  tgcactattcaccaaccaagtattgatatatttgaggcatttgatga 213