Miyakogusa Predicted Gene

Lj2g3v2245120.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2245120.1 Non Chatacterized Hit- tr|C6TEU0|C6TEU0_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,66.98,9e-33,seg,NULL,CUFF.38756.1
         (409 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP034949 similar to UniRef100_A7NYJ9 Cluster: Chromosom...   264   4e-70
gnl|LJGI|BW595031 similar to UniRef100_A7NYJ9 Cluster: Chromosom...    94   8e-19

>gnl|LJGI|BP034949 similar to UniRef100_A7NYJ9 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 180

 Score =  264 bits (133), Expect = 4e-70
 Identities = 171/180 (95%), Gaps = 9/180 (5%)
 Strand = Plus / Minus

                                                                       
Query: 212 caaatcccagcaaacctagtcaccaaaacattgatcacaatccccatcaaaacatcttca 271
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 caaatcccagcaaacctagtcaccaaaacattgatcacaatccccatcaaaacatcttca 121

                                                                       
Query: 272 ggcgcatcgagatcaatcgacgacgccccgtttcgacga--tc-atgccaaac-cacact 327
           |||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||
Sbjct: 120 ggcgcatcgagatcaatcgacgacgccccgtttcgacganttcaatgccaaacncacact 61

                                                                       
Query: 328 cttccctttctcttcc-----aaagccgcaatgagaacattgatatcatagtttccagtc 382
           ||||||||||||||||     |||||||||||||||||||||||||||||||||||||||
Sbjct: 60  cttccctttctcttccannnaaaagccgcaatgagaacattgatatcatagtttccagtc 1


>gnl|LJGI|BW595031 similar to UniRef100_A7NYJ9 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 474

 Score = 93.7 bits (47), Expect = 8e-19
 Identities = 47/47 (100%)
 Strand = Plus / Minus

                                                          
Query: 363 tgatatcatagtttccagtcaatgcattgtgatggggtttgaaaagg 409
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgatatcatagtttccagtcaatgcattgtgatggggtttgaaaagg 428