Miyakogusa Predicted Gene
- Lj2g3v2223020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2223020.1 Non Chatacterized Hit- tr|I3SU04|I3SU04_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,61.84,1e-17,seg,NULL,CUFF.38751.1
(364 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80187 homologue to UniRef100_UPI000050340F Cluster: H... 474 e-133
gnl|LJGI|TC70944 homologue to UniRef100_UPI000050340F Cluster: H... 228 2e-59
gnl|LJGI|TC65715 UniRef100_A4RS62 Cluster: Histone H4; n=1; Ostr... 198 2e-50
gnl|LJGI|TC76382 homologue to UniRef100_UPI000050340F Cluster: H... 188 2e-47
gnl|LJGI|BE122552 homologue to UniRef100_UPI00001D6F72 Cluster: ... 182 1e-45
gnl|LJGI|TC68238 homologue to UniRef100_UPI000066070E Cluster: H... 174 2e-43
gnl|LJGI|TC65660 homologue to UniRef100_Q4SKJ3 Cluster: Histone ... 174 2e-43
gnl|LJGI|FS336919 homologue to UniRef100_UPI0000EB00E4 Cluster: ... 78 4e-14
gnl|LJGI|TC72402 homologue to UniRef100_UPI00001D6F72 Cluster: h... 78 4e-14
gnl|LJGI|TC68590 homologue to UniRef100_UPI0000EB00E4 Cluster: H... 70 1e-11
>gnl|LJGI|TC80187 homologue to UniRef100_UPI000050340F Cluster: Histone H4 [Contains:
Osteogenic growth peptide (OGP)].; n=1; Rattus
norvegicus|Rep: Histone H4 [Contains: Osteogenic growth
peptide (OGP)]. - Rattus norvegicus, complete
Length = 492
Score = 474 bits (239), Expect = e-133
Identities = 242/243 (99%)
Strand = Plus / Minus
Query: 1 atgctcggtgtatgtaaccgcatcacgaatcacattctcgagaaaaatcttgagcacccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atgctcggtgtatgtaaccgcatcacgaatcacattctcgagaaaaatcttgagcacccc 184
Query: 61 tctggtttcctcatagatcaagccactgattctcttcactccgcctcttctcgccaatct 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 183 tctggtttcctcatagatcaagccactgatcctcttcactccgcctcttctcgccaatct 124
Query: 121 ccgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ccgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctctt 64
Query: 181 tgctcctccctttcccaatcccttgcctccctttccacgacccgacattttgatgaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgctcctccctttcccaatcccttgcctccctttccacgacccgacattttgatgaacaa 4
Query: 241 tca 243
|||
Sbjct: 3 tca 1
>gnl|LJGI|TC70944 homologue to UniRef100_UPI000050340F Cluster: Histone H4 [Contains:
Osteogenic growth peptide (OGP)].; n=1; Rattus
norvegicus|Rep: Histone H4 [Contains: Osteogenic growth
peptide (OGP)]. - Rattus norvegicus, complete
Length = 495
Score = 228 bits (115), Expect = 2e-59
Identities = 202/231 (87%)
Strand = Plus / Minus
Query: 1 atgctcggtgtatgtaaccgcatcacgaatcacattctcgagaaaaatcttgagcacccc 60
|||||| ||||| || ||||||||||||||||||||||| | || ||||| | ||| ||
Sbjct: 286 atgctccgtgtacgtcaccgcatcacgaatcacattctccaagaagatcttcaacacacc 227
Query: 61 tctggtttcctcatagatcaagccactgattctcttcactccgcctcttctcgccaatct 120
|| || |||||||||||||| |||||||| |||||||| || ||||| |||||||| ||
Sbjct: 226 cctagtctcctcatagatcaacccactgatcctcttcacgccacctctcctcgccaacct 167
Query: 121 ccgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctctt 180
||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||
Sbjct: 166 ccgaatcgccggcttcgtgatgccctggatgttgtcgcgcagcaccttcctgtgcctctt 107
Query: 181 tgctcctccctttcccaatcccttgcctccctttccacgacccgacatttt 231
||||||||||| || | ||||||||| |||||||||||||| ||||||||
Sbjct: 106 ggctcctcccttgccgagtcccttgccaccctttccacgaccagacatttt 56
>gnl|LJGI|TC65715 UniRef100_A4RS62 Cluster: Histone H4; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Histone H4 - Ostreococcus lucimarinus
(strain CCE9901), complete
Length = 626
Score = 198 bits (100), Expect = 2e-50
Identities = 196/228 (85%)
Strand = Plus / Minus
Query: 1 atgctcggtgtatgtaaccgcatcacgaatcacattctcgagaaaaatcttgagcacccc 60
|||||| ||||| ||||| |||||||||||||||||||||||||| |||||||| || ||
Sbjct: 323 atgctcagtgtaggtaacagcatcacgaatcacattctcgagaaagatcttgagaacacc 264
Query: 61 tctggtttcctcatagatcaagccactgattctcttcactccgcctcttctcgccaatct 120
| || ||||||||||||||||||||||| | |||||| || || || | |||||||
Sbjct: 263 acgagtctcctcatagatcaagccactgatacgcttcacgccacccctgcgagccaatcg 204
Query: 121 ccgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctctt 180
||||||||| ||||||||||||||||| ||||||||||| || ||||| || || | ||
Sbjct: 203 ccgaatcgctggcttcgtgattccctgaatgttgtcgcggagaaccttacggtgtcgttt 144
Query: 181 tgctcctccctttcccaatcccttgcctccctttccacgacccgacat 228
||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 143 cgctcctccctttcccaatcccttgcctccttttccacgcccagacat 96
>gnl|LJGI|TC76382 homologue to UniRef100_UPI000050340F Cluster: Histone H4 [Contains:
Osteogenic growth peptide (OGP)].; n=1; Rattus
norvegicus|Rep: Histone H4 [Contains: Osteogenic growth
peptide (OGP)]. - Rattus norvegicus, complete
Length = 534
Score = 188 bits (95), Expect = 2e-47
Identities = 197/231 (85%)
Strand = Plus / Minus
Query: 1 atgctcggtgtatgtaaccgcatcacgaatcacattctcgagaaaaatcttgagcacccc 60
|||||| ||||| || ||||||||||||||||| ||||| | |||||||| ||||| ||
Sbjct: 277 atgctccgtgtaagtcaccgcatcacgaatcacgttctccaagaaaatcttcagcactcc 218
Query: 61 tctggtttcctcatagatcaagccactgattctcttcactccgcctcttctcgccaatct 120
|| || |||||||||||||| || ||||| ||||| || |||||||| ||||||| ||
Sbjct: 217 cctagtctcctcatagatcaaaccgctgatcctcttgacaccgcctctcctcgccagcct 158
Query: 121 ccgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctctt 180
||||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||
Sbjct: 157 ccgaatcgccggcttcgtgatgccctggatgttgtcgcggagcaccttcctgtgcctctt 98
Query: 181 tgctcctccctttcccaatcccttgcctccctttccacgacccgacatttt 231
|| || ||||| || | |||||| || |||||||||||||| ||||||||
Sbjct: 97 ggcgccgcccttgccgagtccctttccgccctttccacgaccagacatttt 47
>gnl|LJGI|BE122552 homologue to UniRef100_UPI00001D6F72 Cluster: histone cluster 4,
H4; n=2; Mus musculus|Rep: histone cluster 4, H4 - Mus
musculus, partial (79%)
Length = 372
Score = 182 bits (92), Expect = 1e-45
Identities = 194/228 (85%)
Strand = Plus / Minus
Query: 2 tgctcggtgtatgtaaccgcatcacgaatcacattctcgagaaaaatcttgagcacccct 61
||||| ||||| ||||| ||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 351 tgctcagtgtaggtaacagcatcccggatcacattctcgagaaagatcttgagcacgccg 292
Query: 62 ctggtttcctcatagatcaagccactgattctcttcactccgcctcttctcgccaatctc 121
| || ||||||||||| | ||| ||||| | |||||| ||||| || | |||||| | |
Sbjct: 291 cgtgtctcctcatagataaggccgctgatacgcttcacgccgcccctacgcgccaaacgc 232
Query: 122 cgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctcttt 181
|||||||||||||| || || |||||||||||||||||||||||||| || || | |||
Sbjct: 231 cgaatcgccggcttggttatgccctggatgttgtcgcgcagcaccttacggtgtcgtttt 172
Query: 182 gctcctccctttcccaatcccttgcctccctttccacgacccgacatt 229
|||||||||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 171 gctcctccctttcctaatcccttgcctccttttccacgccctgacatt 124
>gnl|LJGI|TC68238 homologue to UniRef100_UPI000066070E Cluster: Homolog of Homo
sapiens "H2A histone family, member X (H2AFX), mRNA;
n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens "H2A
histone family, member X (H2AFX), mRNA - Takifugu
rubripes, partial (33%)
Length = 603
Score = 174 bits (88), Expect = 2e-43
Identities = 193/228 (84%)
Strand = Plus / Minus
Query: 1 atgctcggtgtatgtaaccgcatcacgaatcacattctcgagaaaaatcttgagcacccc 60
|||||| ||||| ||||| |||||||||||||||||||| ||||| |||||||| || ||
Sbjct: 294 atgctcagtgtaggtaacagcatcacgaatcacattctcaagaaagatcttgagaacacc 235
Query: 61 tctggtttcctcatagatcaagccactgattctcttcactccgcctcttctcgccaatct 120
| || ||||||||||||||||||||||| | |||||| || || || | ||||| |
Sbjct: 234 acgagtctcctcatagatcaagccactgatacgcttcacgccacccctgcgagccaaacg 175
Query: 121 ccgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctctt 180
||||||||| ||||||||||||||||||||||||||||| || ||||| || |||| ||
Sbjct: 174 ccgaatcgctggcttcgtgattccctggatgttgtcgcggaggaccttacggtgccgttt 115
Query: 181 tgctcctccctttcccaatcccttgcctccctttccacgacccgacat 228
||||||||||| |||||||| || ||||| |||||||| || |||||
Sbjct: 114 ggctcctcccttgcccaatcctttacctccttttccacgcccagacat 67
>gnl|LJGI|TC65660 homologue to UniRef100_Q4SKJ3 Cluster: Histone H4; n=1; Tetraodon
nigroviridis|Rep: Histone H4 - Tetraodon nigroviridis
(Green puffer), partial (45%)
Length = 681
Score = 174 bits (88), Expect = 2e-43
Identities = 193/228 (84%)
Strand = Plus / Minus
Query: 1 atgctcggtgtatgtaaccgcatcacgaatcacattctcgagaaaaatcttgagcacccc 60
|||||| ||||| ||||| |||||||||||||||||||| ||||| ||||| || || ||
Sbjct: 320 atgctcagtgtaggtaacagcatcacgaatcacattctcaagaaagatcttcagaacacc 261
Query: 61 tctggtttcctcatagatcaagccactgattctcttcactccgcctcttctcgccaatct 120
| || ||||||||||||||||||||||| | |||||| || || || | ||||| |
Sbjct: 260 acgagtctcctcatagatcaagccactgatacgcttcacgccacccctgcgagccaaacg 201
Query: 121 ccgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctctt 180
||||||||| ||||||||||||||||| ||||||||||| || ||||| || || | ||
Sbjct: 200 ccgaatcgctggcttcgtgattccctgaatgttgtcgcggagaaccttacggtgtcgttt 141
Query: 181 tgctcctccctttcccaatcccttgcctccctttccacgacccgacat 228
||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 140 cgctcctccctttcccaatcccttgcctccttttccacgcccagacat 93
>gnl|LJGI|FS336919 homologue to UniRef100_UPI0000EB00E4 Cluster: Histone H4; n=1;
Canis lupus familiaris|Rep: Histone H4 - Canis
familiaris, partial (96%)
Length = 529
Score = 77.8 bits (39), Expect = 4e-14
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 122 cgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctcttt 181
|||||||| ||||| ||||||||||||||||| || | ||| ||||| | || | |||
Sbjct: 173 cgaatcgcaggcttggtgattccctggatgttatccctcagaaccttcctgtgacgctta 114
Query: 182 gctcctccctttcccaatcccttgcctccctttcc 216
||||||||||| ||||| |||||||||||||||||
Sbjct: 113 gctcctcccttgcccaaacccttgcctccctttcc 79
>gnl|LJGI|TC72402 homologue to UniRef100_UPI00001D6F72 Cluster: histone cluster 4,
H4; n=2; Mus musculus|Rep: histone cluster 4, H4 - Mus
musculus, complete
Length = 612
Score = 77.8 bits (39), Expect = 4e-14
Identities = 171/215 (79%)
Strand = Plus / Minus
Query: 2 tgctcggtgtatgtaaccgcatcacgaatcacattctcgagaaaaatcttgagcacccct 61
||||| ||||| ||||| ||||||||||| || |||||||| || |||||||| || ||
Sbjct: 284 tgctcagtgtaggtaacagcatcacgaataacgttctcgaggaagatcttgagaacaccg 225
Query: 62 ctggtttcctcatagatcaagccactgattctcttcactccgcctcttctcgccaatctc 121
| ||||| |||||||| | || ||||| | |||||| || || | || || | |
Sbjct: 224 cgagtttcttcatagatgagaccgctgatacgcttcacaccaccacgccttgcgagacgg 165
Query: 122 cgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctcttt 181
||||| || ||||| ||||||||||||||||| || | ||| ||||| | || | |||
Sbjct: 164 cgaatggcaggcttggtgattccctggatgttatccctcagaaccttcctgtgacgcttc 105
Query: 182 gctcctccctttcccaatcccttgcctccctttcc 216
||||||||||||||||| |||||||||||||||||
Sbjct: 104 gctcctccctttcccaaacccttgcctccctttcc 70
>gnl|LJGI|TC68590 homologue to UniRef100_UPI0000EB00E4 Cluster: Histone H4; n=1;
Canis lupus familiaris|Rep: Histone H4 - Canis
familiaris, partial (97%)
Length = 590
Score = 69.9 bits (35), Expect = 1e-11
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 122 cgaatcgccggcttcgtgattccctggatgttgtcgcgcagcaccttgcgatgcctcttt 181
|||||||| ||||| ||||||||||||||||| || | ||| ||||| || || | |||
Sbjct: 179 cgaatcgcaggcttggtgattccctggatgttatccctcagaaccttccggtgacgcttc 120
Query: 182 gctcctccctttcccaatcccttgcctccctttcc 216
|||||||| || ||||| ||||||||||| |||||
Sbjct: 119 gctcctcctttacccaaacccttgcctccttttcc 85