Miyakogusa Predicted Gene
- Lj2g3v2220780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2220780.1 tr|Q10KX9|Q10KX9_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=LOC_Os03g25110 PE=2
SV=1,26.76,0.00000000000002,seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.38741.1
(1613 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68320 similar to UniRef100_A7Q2X3 Cluster: Chromosome... 1227 0.0
gnl|LJGI|BP035422 similar to UniRef100_A7Q2X3 Cluster: Chromosom... 1068 0.0
gnl|LJGI|TC63243 similar to UniRef100_A7Q2X3 Cluster: Chromosome... 1035 0.0
gnl|LJGI|TC57743 similar to UniRef100_A7Q2X3 Cluster: Chromosome... 967 0.0
>gnl|LJGI|TC68320 similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 679
Score = 1227 bits (619), Expect = 0.0
Identities = 619/619 (100%)
Strand = Plus / Plus
Query: 995 gggtcacacccatgaagctcatggatgtgaaggatgctttgatcatgagaaagtttggtt 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtcacacccatgaagctcatggatgtgaaggatgctttgatcatgagaaagtttggtt 60
Query: 1055 cggtcgagccagataactactggtatagagtctgtgaaggggagacagaatctgttgttc 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggtcgagccagataactactggtatagagtctgtgaaggggagacagaatctgttgttc 120
Query: 1115 aaaggccatggcacttgctatggaaatcgaggcgcttgatggatatcgtgtctgccatag 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaggccatggcacttgctatggaaatcgaggcgcttgatggatatcgtgtctgccatag 180
Query: 1175 cttcaaggttaaactgggactatgattcagttcatgttgagagaggagaaaaggcgagga 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcaaggttaaactgggactatgattcagttcatgttgagagaggagaaaaggcgagga 240
Query: 1235 acagggagctttggcctaatctcgatgctgatacctcttctgatgcacttctctcgacct 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagggagctttggcctaatctcgatgctgatacctcttctgatgcacttctctcgacct 300
Query: 1295 tgcgggacaaggttgatgaagggagaaacctctacatagcaacaaatgagcctgacacat 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcgggacaaggttgatgaagggagaaacctctacatagcaacaaatgagcctgacacat 360
Query: 1355 ctttcttcgatcctctgaaagataagtacaccactcattttctcgacgagtacaaggatc 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctttcttcgatcctctgaaagataagtacaccactcattttctcgacgagtacaaggatc 420
Query: 1415 tttgggaggaaaatagcgaatggtactctgagacgacaaagctcaataacggtgttccag 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttgggaggaaaatagcgaatggtactctgagacgacaaagctcaataacggtgttccag 480
Query: 1475 ttgaatttgatggttacatgagagtgtccattgatacagaagtgttcttgagaggtaaga 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgaatttgatggttacatgagagtgtccattgatacagaagtgttcttgagaggtaaga 540
Query: 1535 agcagcttgaaactttcaatgatttaaccagtgattgcaaggacggtattaatacatgta 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agcagcttgaaactttcaatgatttaaccagtgattgcaaggacggtattaatacatgta 600
Query: 1595 atgctgcagcaaactaaat 1613
|||||||||||||||||||
Sbjct: 601 atgctgcagcaaactaaat 619
>gnl|LJGI|BP035422 similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 559
Score = 1068 bits (539), Expect = 0.0
Identities = 539/539 (100%)
Strand = Plus / Plus
Query: 491 ctgagaattgtacacttagtgtcgttagcattggggaataccatagtggtcccaatgcaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 ctgagaattgtacacttagtgtcgttagcattggggaataccatagtggtcccaatgcaa 80
Query: 551 ggaagaggaagaagaatcagaaagccgggttagagaagtcaacacaaaagctggacgagg 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ggaagaggaagaagaatcagaaagccgggttagagaagtcaacacaaaagctggacgagg 140
Query: 611 cgaacgcgttgcctgttgttggagagtttgttaatgacagcctccctgtattcagtgaaa 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cgaacgcgttgcctgttgttggagagtttgttaatgacagcctccctgtattcagtgaaa 200
Query: 671 gttcgtttggtcagggtaaatacttggtttatcatggtggtggagacaggtgtaagagca 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttcgtttggtcagggtaaatacttggtttatcatggtggtggagacaggtgtaagagca 260
Query: 731 tgaatcatttcttgtggagtttcttgtgtgctctaggggaagctcagtacctaaaccgaa 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaatcatttcttgtggagtttcttgtgtgctctaggggaagctcagtacctaaaccgaa 320
Query: 791 cattggttatggatttgagcatatgtctgtcttcgatctacacttcatcgaagcaggatg 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattggttatggatttgagcatatgtctgtcttcgatctacacttcatcgaagcaggatg 380
Query: 851 aggaaggcaaagatttcaggttttactttgatttcgagcatttaaaggaagccgcgtctg 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaaggcaaagatttcaggttttactttgatttcgagcatttaaaggaagccgcgtctg 440
Query: 911 tgctggacaaggaacagttttgggcagattggaataagtggcaacaaaaagatgggatga 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctggacaaggaacagttttgggcagattggaataagtggcaacaaaaagatgggatga 500
Query: 971 ctcaacatcttgtggaggatttcagggtcacacccatgaagctcatggatgtgaaggat 1029
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcaacatcttgtggaggatttcagggtcacacccatgaagctcatggatgtgaaggat 559
>gnl|LJGI|TC63243 similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 736
Score = 1035 bits (522), Expect = 0.0
Identities = 522/522 (100%)
Strand = Plus / Plus
Query: 1092 aggggagacagaatctgttgttcaaaggccatggcacttgctatggaaatcgaggcgctt 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggggagacagaatctgttgttcaaaggccatggcacttgctatggaaatcgaggcgctt 61
Query: 1152 gatggatatcgtgtctgccatagcttcaaggttaaactgggactatgattcagttcatgt 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gatggatatcgtgtctgccatagcttcaaggttaaactgggactatgattcagttcatgt 121
Query: 1212 tgagagaggagaaaaggcgaggaacagggagctttggcctaatctcgatgctgatacctc 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgagagaggagaaaaggcgaggaacagggagctttggcctaatctcgatgctgatacctc 181
Query: 1272 ttctgatgcacttctctcgaccttgcgggacaaggttgatgaagggagaaacctctacat 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttctgatgcacttctctcgaccttgcgggacaaggttgatgaagggagaaacctctacat 241
Query: 1332 agcaacaaatgagcctgacacatctttcttcgatcctctgaaagataagtacaccactca 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agcaacaaatgagcctgacacatctttcttcgatcctctgaaagataagtacaccactca 301
Query: 1392 ttttctcgacgagtacaaggatctttgggaggaaaatagcgaatggtactctgagacgac 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttttctcgacgagtacaaggatctttgggaggaaaatagcgaatggtactctgagacgac 361
Query: 1452 aaagctcaataacggtgttccagttgaatttgatggttacatgagagtgtccattgatac 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaagctcaataacggtgttccagttgaatttgatggttacatgagagtgtccattgatac 421
Query: 1512 agaagtgttcttgagaggtaagaagcagcttgaaactttcaatgatttaaccagtgattg 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agaagtgttcttgagaggtaagaagcagcttgaaactttcaatgatttaaccagtgattg 481
Query: 1572 caaggacggtattaatacatgtaatgctgcagcaaactaaat 1613
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caaggacggtattaatacatgtaatgctgcagcaaactaaat 523
>gnl|LJGI|TC57743 similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 913
Score = 967 bits (488), Expect = 0.0
Identities = 522/534 (97%), Gaps = 12/534 (2%)
Strand = Plus / Plus
Query: 1 atgtttgcttttctgtgtttgttgttggggttttggtttttaccattatggctgctactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtttgcttttctgtgtttgttgttggggttttggtttttaccattatggctgctactt 440
Query: 61 atgaacctgaggatcctttgtttaacccttcaaccaagatatctacattcctcacttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaacctgaggatcctttgtttaacccttcaaccaagatatctacattcctcacttcca 500
Query: 121 aatccaatgccactttcaagtctgatgacagtgttgttaggactggtgaggatttcatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatccaatgccactttcaagtctgatgacagtgttgttaggactggtgaggatttcatgg 560
Query: 181 ctgccaatgagactgcttttggcaccatcattaacatggctgatgttgataactcggcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgccaatgagactgcttttggcaccatcattaacatggctgatgttgataactcggcta 620
Query: 241 gcgcttcaaccgccgag-----------ggggtctcagtgtgagggaagttcgggcccta 289
||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 621 gcgcttcaaccgccgaggctgaggctgaggggtctcagtgtga-ggaagttcgggcccta 679
Query: 290 ttgattgtagggaccctgaggtgtttcatttgatgatgagggccactattgagaagtttc 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttgattgtagggaccctgaggtgtttcatttgatgatgagggccactattgagaagtttc 739
Query: 350 aggatatccatttttaccgattcgggaaacctactcccgggtccaatgacagtacttgcg 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggatatccatttttaccgattcgggaaacctactcccgggtccaatgacagtacttgcg 799
Query: 410 atatggcatggcggtttcggcccaaggaagggaaggctgctgctttttataaggattata 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atatggcatggcggtttcggcccaaggaagggaaggctgctgctttttataaggattata 859
Query: 470 gaaggtttgtgattgagaagtctgagaattgtacacttagtgtcgttagcattg 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaaggtttgtgattgagaagtctgagaattgtacacttagtgtcgttagcattg 913