Miyakogusa Predicted Gene

Lj2g3v2220780.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2220780.1 tr|Q10KX9|Q10KX9_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=LOC_Os03g25110 PE=2
SV=1,26.76,0.00000000000002,seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.38741.1
         (1613 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68320 similar to UniRef100_A7Q2X3 Cluster: Chromosome...  1227   0.0  
gnl|LJGI|BP035422 similar to UniRef100_A7Q2X3 Cluster: Chromosom...  1068   0.0  
gnl|LJGI|TC63243 similar to UniRef100_A7Q2X3 Cluster: Chromosome...  1035   0.0  
gnl|LJGI|TC57743 similar to UniRef100_A7Q2X3 Cluster: Chromosome...   967   0.0  

>gnl|LJGI|TC68320 similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_47, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (37%)
          Length = 679

 Score = 1227 bits (619), Expect = 0.0
 Identities = 619/619 (100%)
 Strand = Plus / Plus

                                                                        
Query: 995  gggtcacacccatgaagctcatggatgtgaaggatgctttgatcatgagaaagtttggtt 1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gggtcacacccatgaagctcatggatgtgaaggatgctttgatcatgagaaagtttggtt 60

                                                                        
Query: 1055 cggtcgagccagataactactggtatagagtctgtgaaggggagacagaatctgttgttc 1114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   cggtcgagccagataactactggtatagagtctgtgaaggggagacagaatctgttgttc 120

                                                                        
Query: 1115 aaaggccatggcacttgctatggaaatcgaggcgcttgatggatatcgtgtctgccatag 1174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aaaggccatggcacttgctatggaaatcgaggcgcttgatggatatcgtgtctgccatag 180

                                                                        
Query: 1175 cttcaaggttaaactgggactatgattcagttcatgttgagagaggagaaaaggcgagga 1234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  cttcaaggttaaactgggactatgattcagttcatgttgagagaggagaaaaggcgagga 240

                                                                        
Query: 1235 acagggagctttggcctaatctcgatgctgatacctcttctgatgcacttctctcgacct 1294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  acagggagctttggcctaatctcgatgctgatacctcttctgatgcacttctctcgacct 300

                                                                        
Query: 1295 tgcgggacaaggttgatgaagggagaaacctctacatagcaacaaatgagcctgacacat 1354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  tgcgggacaaggttgatgaagggagaaacctctacatagcaacaaatgagcctgacacat 360

                                                                        
Query: 1355 ctttcttcgatcctctgaaagataagtacaccactcattttctcgacgagtacaaggatc 1414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  ctttcttcgatcctctgaaagataagtacaccactcattttctcgacgagtacaaggatc 420

                                                                        
Query: 1415 tttgggaggaaaatagcgaatggtactctgagacgacaaagctcaataacggtgttccag 1474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tttgggaggaaaatagcgaatggtactctgagacgacaaagctcaataacggtgttccag 480

                                                                        
Query: 1475 ttgaatttgatggttacatgagagtgtccattgatacagaagtgttcttgagaggtaaga 1534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  ttgaatttgatggttacatgagagtgtccattgatacagaagtgttcttgagaggtaaga 540

                                                                        
Query: 1535 agcagcttgaaactttcaatgatttaaccagtgattgcaaggacggtattaatacatgta 1594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  agcagcttgaaactttcaatgatttaaccagtgattgcaaggacggtattaatacatgta 600

                               
Query: 1595 atgctgcagcaaactaaat 1613
            |||||||||||||||||||
Sbjct: 601  atgctgcagcaaactaaat 619


>gnl|LJGI|BP035422 similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_47, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 559

 Score = 1068 bits (539), Expect = 0.0
 Identities = 539/539 (100%)
 Strand = Plus / Plus

                                                                        
Query: 491  ctgagaattgtacacttagtgtcgttagcattggggaataccatagtggtcccaatgcaa 550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21   ctgagaattgtacacttagtgtcgttagcattggggaataccatagtggtcccaatgcaa 80

                                                                        
Query: 551  ggaagaggaagaagaatcagaaagccgggttagagaagtcaacacaaaagctggacgagg 610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81   ggaagaggaagaagaatcagaaagccgggttagagaagtcaacacaaaagctggacgagg 140

                                                                        
Query: 611  cgaacgcgttgcctgttgttggagagtttgttaatgacagcctccctgtattcagtgaaa 670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141  cgaacgcgttgcctgttgttggagagtttgttaatgacagcctccctgtattcagtgaaa 200

                                                                        
Query: 671  gttcgtttggtcagggtaaatacttggtttatcatggtggtggagacaggtgtaagagca 730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201  gttcgtttggtcagggtaaatacttggtttatcatggtggtggagacaggtgtaagagca 260

                                                                        
Query: 731  tgaatcatttcttgtggagtttcttgtgtgctctaggggaagctcagtacctaaaccgaa 790
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261  tgaatcatttcttgtggagtttcttgtgtgctctaggggaagctcagtacctaaaccgaa 320

                                                                        
Query: 791  cattggttatggatttgagcatatgtctgtcttcgatctacacttcatcgaagcaggatg 850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321  cattggttatggatttgagcatatgtctgtcttcgatctacacttcatcgaagcaggatg 380

                                                                        
Query: 851  aggaaggcaaagatttcaggttttactttgatttcgagcatttaaaggaagccgcgtctg 910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381  aggaaggcaaagatttcaggttttactttgatttcgagcatttaaaggaagccgcgtctg 440

                                                                        
Query: 911  tgctggacaaggaacagttttgggcagattggaataagtggcaacaaaaagatgggatga 970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441  tgctggacaaggaacagttttgggcagattggaataagtggcaacaaaaagatgggatga 500

                                                                       
Query: 971  ctcaacatcttgtggaggatttcagggtcacacccatgaagctcatggatgtgaaggat 1029
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501  ctcaacatcttgtggaggatttcagggtcacacccatgaagctcatggatgtgaaggat 559


>gnl|LJGI|TC63243 similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_47, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (32%)
          Length = 736

 Score = 1035 bits (522), Expect = 0.0
 Identities = 522/522 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1092 aggggagacagaatctgttgttcaaaggccatggcacttgctatggaaatcgaggcgctt 1151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    aggggagacagaatctgttgttcaaaggccatggcacttgctatggaaatcgaggcgctt 61

                                                                        
Query: 1152 gatggatatcgtgtctgccatagcttcaaggttaaactgggactatgattcagttcatgt 1211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   gatggatatcgtgtctgccatagcttcaaggttaaactgggactatgattcagttcatgt 121

                                                                        
Query: 1212 tgagagaggagaaaaggcgaggaacagggagctttggcctaatctcgatgctgatacctc 1271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  tgagagaggagaaaaggcgaggaacagggagctttggcctaatctcgatgctgatacctc 181

                                                                        
Query: 1272 ttctgatgcacttctctcgaccttgcgggacaaggttgatgaagggagaaacctctacat 1331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  ttctgatgcacttctctcgaccttgcgggacaaggttgatgaagggagaaacctctacat 241

                                                                        
Query: 1332 agcaacaaatgagcctgacacatctttcttcgatcctctgaaagataagtacaccactca 1391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  agcaacaaatgagcctgacacatctttcttcgatcctctgaaagataagtacaccactca 301

                                                                        
Query: 1392 ttttctcgacgagtacaaggatctttgggaggaaaatagcgaatggtactctgagacgac 1451
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  ttttctcgacgagtacaaggatctttgggaggaaaatagcgaatggtactctgagacgac 361

                                                                        
Query: 1452 aaagctcaataacggtgttccagttgaatttgatggttacatgagagtgtccattgatac 1511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  aaagctcaataacggtgttccagttgaatttgatggttacatgagagtgtccattgatac 421

                                                                        
Query: 1512 agaagtgttcttgagaggtaagaagcagcttgaaactttcaatgatttaaccagtgattg 1571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  agaagtgttcttgagaggtaagaagcagcttgaaactttcaatgatttaaccagtgattg 481

                                                      
Query: 1572 caaggacggtattaatacatgtaatgctgcagcaaactaaat 1613
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482  caaggacggtattaatacatgtaatgctgcagcaaactaaat 523


>gnl|LJGI|TC57743 similar to UniRef100_A7Q2X3 Cluster: Chromosome chr12 scaffold_47,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_47, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (33%)
          Length = 913

 Score =  967 bits (488), Expect = 0.0
 Identities = 522/534 (97%), Gaps = 12/534 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtttgcttttctgtgtttgttgttggggttttggtttttaccattatggctgctactt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtttgcttttctgtgtttgttgttggggttttggtttttaccattatggctgctactt 440

                                                                       
Query: 61  atgaacctgaggatcctttgtttaacccttcaaccaagatatctacattcctcacttcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaacctgaggatcctttgtttaacccttcaaccaagatatctacattcctcacttcca 500

                                                                       
Query: 121 aatccaatgccactttcaagtctgatgacagtgttgttaggactggtgaggatttcatgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatccaatgccactttcaagtctgatgacagtgttgttaggactggtgaggatttcatgg 560

                                                                       
Query: 181 ctgccaatgagactgcttttggcaccatcattaacatggctgatgttgataactcggcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgccaatgagactgcttttggcaccatcattaacatggctgatgttgataactcggcta 620

                                                                       
Query: 241 gcgcttcaaccgccgag-----------ggggtctcagtgtgagggaagttcgggcccta 289
           |||||||||||||||||           ||||||||||||||| ||||||||||||||||
Sbjct: 621 gcgcttcaaccgccgaggctgaggctgaggggtctcagtgtga-ggaagttcgggcccta 679

                                                                       
Query: 290 ttgattgtagggaccctgaggtgtttcatttgatgatgagggccactattgagaagtttc 349
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttgattgtagggaccctgaggtgtttcatttgatgatgagggccactattgagaagtttc 739

                                                                       
Query: 350 aggatatccatttttaccgattcgggaaacctactcccgggtccaatgacagtacttgcg 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggatatccatttttaccgattcgggaaacctactcccgggtccaatgacagtacttgcg 799

                                                                       
Query: 410 atatggcatggcggtttcggcccaaggaagggaaggctgctgctttttataaggattata 469
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atatggcatggcggtttcggcccaaggaagggaaggctgctgctttttataaggattata 859

                                                                 
Query: 470 gaaggtttgtgattgagaagtctgagaattgtacacttagtgtcgttagcattg 523
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaaggtttgtgattgagaagtctgagaattgtacacttagtgtcgttagcattg 913