Miyakogusa Predicted Gene

Lj2g3v2219770.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2219770.1 Non Chatacterized Hit- tr|B9T1U7|B9T1U7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,77.78,2e-17,UBA-like,UBA-like; DUF1296,Protein of unknown function
DUF1296; APOPTOSIS INHIBITOR 5-RELATED,NULL,CUFF.38736.1
         (276 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71256 weakly similar to UniRef100_A7Q2X5 Cluster: Chr...   315   8e-86
gnl|LJGI|AV406715 weakly similar to UniRef100_A7Q2X5 Cluster: Ch...   268   2e-71

>gnl|LJGI|TC71256 weakly similar to UniRef100_A7Q2X5 Cluster: Chromosome chr12
           scaffold_47, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (14%)
          Length = 904

 Score =  315 bits (159), Expect = 8e-86
 Identities = 162/163 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcggtggcgggtttagggcttcaattccgaacagtgtgaagaagacgatccagaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 atgagcggtggcgggtttagggcttcaattccgaacagtgtgaagaagacgatccagaac 253

                                                                       
Query: 61  atcaaagagatcacaggcaatcacagtgatgaagacatctatgcaatgcttaaggaatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atcaaagagatcacaggcaatcacagtgatgaagacatctatgcaatgcttaaggaatgt 313

                                                      
Query: 121 tctatggatcccaacgagaccactcagaagctcctccttcagg 163
           ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 314 tctatggatcccaacgagaccacgcagaagctcctccttcagg 356


>gnl|LJGI|AV406715 weakly similar to UniRef100_A7Q2X5 Cluster: Chromosome chr12
           scaffold_47, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 405

 Score =  268 bits (135), Expect = 2e-71
 Identities = 135/135 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcggtggcgggtttagggcttcaattccgaacagtgtgaagaagacgatccagaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atgagcggtggcgggtttagggcttcaattccgaacagtgtgaagaagacgatccagaac 330

                                                                       
Query: 61  atcaaagagatcacaggcaatcacagtgatgaagacatctatgcaatgcttaaggaatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atcaaagagatcacaggcaatcacagtgatgaagacatctatgcaatgcttaaggaatgt 390

                          
Query: 121 tctatggatcccaac 135
           |||||||||||||||
Sbjct: 391 tctatggatcccaac 405