Miyakogusa Predicted Gene
- Lj2g3v2209750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2209750.1 Non Chatacterized Hit- tr|I1N9R5|I1N9R5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51268
PE,34.12,0.00000000008,seg,NULL; ARM repeat,Armadillo-type fold;
Arm,Armadillo; no description,Armadillo-like helical;
ARMA,CUFF.38734.1
(1179 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011384 similar to UniRef100_A7Q2X4 Cluster: Chromosom... 1009 0.0
gnl|LJGI|BP062406 similar to UniRef100_A7Q2X4 Cluster: Chromosom... 886 0.0
>gnl|LJGI|GO011384 similar to UniRef100_A7Q2X4 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 720
Score = 1009 bits (509), Expect = 0.0
Identities = 536/541 (99%), Gaps = 3/541 (0%)
Strand = Plus / Plus
Query: 118 acccagatattgaacttgtcggagaatctcatcaatggggaacttaacaccaagattgaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 acccagatattgaacttgtcggagaatctcatcaatggggaacttaacaccaagattgaa 228
Query: 178 gctgcaagagaaatcagaagactcattcgcaaatcttcttctcccaagacccgcttcaag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gctgcaagagaaatcagaagactcattcgcaaatcttcttctcccaagacccgcttcaag 288
Query: 238 cttgctgcagctggtgtcattcaaccccttgtcttcatgctctcttcttccaaccttgat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 cttgctgcagctggtgtcattcaaccccttgtcttcatgctctcttcttccaaccttgat 348
Query: 298 gcccgtgaatcctctctcctcgctctcctcaatctcgctgttcgcaatgaaaggaacaag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gcccgtgaatcctctctcctcgctctcctcaatctcgctgttcgcaatgaaaggaacaag 408
Query: 358 gtcacaatagtgagtgctggtgccatgcctcctctggtggagctcctcaagatgcaaaat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gtcacaatagtgagtgctggtgccatgcctcctctggtggagctcctcaagatgcaaaat 468
Query: 418 agtcgaagcatgcgggagttagctacagcagctatcctcacactctctgccgctgcaccc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 agtcgaagcatgcgggagttagctacagcagctatcctcacactctctgccgctgcaccc 528
Query: 478 aacaagcccattattgctgcttctggagctgcacctctccttgttcagattctcaaatct 537
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aacaagcccattattgccgcttctggagctgcacctctccttgttcagattctcaaatct 588
Query: 538 ggaagtcttcaaggaaaagttgatgctgtcaccgtcctccataatctttccaccgacact 597
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ggaagtcttcaaagaaaagttgatgctgtcaccgtcctccataatctttccaccgacact 648
Query: 598 gaggattcaactgaacttctcgacgctagtgctgtttcccctctcatcaacctccttaaa 657
|| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 649 ga-gattcaactgaacttctcgacgctagtgctgttt-ccctctcatcaa-ctccttaaa 705
Query: 658 a 658
|
Sbjct: 706 a 706
Score = 95.6 bits (48), Expect = 6e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atggcagagggagagagcacagtggaaccagaacctgaagcaaccgag 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 atggcagagggagagagcacagtggaaccagaacctgaagcaaccgag 99
>gnl|LJGI|BP062406 similar to UniRef100_A7Q2X4 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 510
Score = 886 bits (447), Expect = 0.0
Identities = 459/462 (99%), Gaps = 1/462 (0%)
Strand = Plus / Minus
Query: 719 actctgaagagggacgaaccgcaatctcacttgtagatggtggaattttaaccctagtgg 778
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 510 actctgaagagggacgaaccgcnatctcacttgtagatggtggaattttaaccctagtgg 451
Query: 779 agacagttgaagatggatcacttgtcagcacagagcatgctgttggagcgttgttatcat 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 agacagttgaagatggatcacttgtcagcacagagcatgctgttggagcgttgttatcat 391
Query: 839 tatgtcgaagctcccgggataaataccgggaacttattcttaacgaaggagcgattccgg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tatgtcgaagctcccgggataaataccgggaacttattcttaacgaaggagcgattccgg 331
Query: 899 gtctgttacggctgactgtggatggcacggccgaagctcaaaatagagcccgcgtgcttc 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gtctgttacggctgactgtggatggcacggccgaagctcaaaatagagcccgcgtgcttc 271
Query: 959 tagatttgcttagagattctcctcctgagaaaacactaacctcctcaattt-tggagaaa 1017
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 270 tagatttgcttagagattctcctcctgagaaaacactaacctcctcgatttgtggagaaa 211
Query: 1018 attgtttttgacattgccgaaagggtagatggagtagataaagctcctgaaactgcgaaa 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 attgtttttgacattgccgaaagggtagatggagtagataaagctcctgaaactgcgaaa 151
Query: 1078 cgattattgcaagatatggttcaaaggagtatggagcacagcatgaattgcatccagcag 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 cgattattgcaagatatggttcaaaggagtatggagcacagcatgaattgcatccagcag 91
Query: 1138 agagctgcatcctgtaatcctgtgattccatcaacttgatat 1179
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 agagctgcatcctgtaatcctgtgattccatcaacttgatat 49