Miyakogusa Predicted Gene

Lj2g3v2197630.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2197630.1 Non Chatacterized Hit- tr|C5YIN1|C5YIN1_SORBI
Putative uncharacterized protein Sb07g027350
OS=Sorghu,26.77,8e-18,SUBFAMILY NOT NAMED,NULL; CGI-12
PROTEIN-RELATED,NULL; seg,NULL; Mitochondrial termination factor
re,CUFF.38722.1
         (1567 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68593 similar to UniRef100_A7PU38 Cluster: Chromosome...  1291   0.0  
gnl|LJGI|TC70798 similar to UniRef100_A7PU38 Cluster: Chromosome...   291   7e-78

>gnl|LJGI|TC68593 similar to UniRef100_A7PU38 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 769

 Score = 1291 bits (651), Expect = 0.0
 Identities = 651/651 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtccttttctggtgaattaacaaaacccagtttttcaattggtcaaacagaaatgcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atgtccttttctggtgaattaacaaaacccagtttttcaattggtcaaacagaaatgcct 178

                                                                       
Query: 61  attcttacatttggtcattctaagttgggtgctacactagctcttaggttgccatgtaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 attcttacatttggtcattctaagttgggtgctacactagctcttaggttgccatgtaac 238

                                                                       
Query: 121 tgctttaggaggatggggttgattacaaagcttcagtattctgttacgaatagtgtattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgctttaggaggatggggttgattacaaagcttcagtattctgttacgaatagtgtattg 298

                                                                       
Query: 181 gcttctagaactgtggattcgccggggtccaagcgggactctggtccggtgagtaggagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcttctagaactgtggattcgccggggtccaagcgggactctggtccggtgagtaggagg 358

                                                                       
Query: 241 cggggaggcccctcgtcgctatacgttcggcctagtttatcggatatgaagaaagataag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cggggaggcccctcgtcgctatacgttcggcctagtttatcggatatgaagaaagataag 418

                                                                       
Query: 301 gcggtgatgcgtgagaaggtttatgagttcttgcgggggatcggcgttgttcctgatgag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcggtgatgcgtgagaaggtttatgagttcttgcgggggatcggcgttgttcctgatgag 478

                                                                       
Query: 361 cttgatggtcttgaacttcctgtgacggttgatgttatgagggagcgcgtggattttctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cttgatggtcttgaacttcctgtgacggttgatgttatgagggagcgcgtggattttctt 538

                                                                       
Query: 421 cacagcttggggcttacgattgaggacattaacaactatccacttgttcttggctgcagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cacagcttggggcttacgattgaggacattaacaactatccacttgttcttggctgcagt 598

                                                                       
Query: 481 gtcaagaagaacatgattcctgtgcttgatttccttggaaaattgggggtcaggaaatcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gtcaagaagaacatgattcctgtgcttgatttccttggaaaattgggggtcaggaaatcc 658

                                                                       
Query: 541 actttcacgcagtttttgcagagatatccacaggttctccatgccagtgtggttgtggat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 actttcacgcagtttttgcagagatatccacaggttctccatgccagtgtggttgtggat 718

                                                              
Query: 601 cttgtaccggtggtcaagtatcttgaggggatggatatcaggcccaatgat 651
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cttgtaccggtggtcaagtatcttgaggggatggatatcaggcccaatgat 769


>gnl|LJGI|TC70798 similar to UniRef100_A7PU38 Cluster: Chromosome chr7 scaffold_31,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_31, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 589

 Score =  291 bits (147), Expect = 7e-78
 Identities = 150/151 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1417 aatgagaaatttgagcagcgaatggactatgacactattgatatggaagagatggaaatg 1476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aatgagaaatttgagcagcgaatggactatgacactattgatatggaagagatggaaatg 60

                                                                        
Query: 1477 gaaccatcatttgacatgaattcattgatgcagccaaggagtgatggatcagattctgat 1536
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61   gaaccatcatttgacatgaattcattgatgcagcccaggagtgatggatcagattctgat 120

                                           
Query: 1537 tatgaagacagtgatgatgattatgattaga 1567
            |||||||||||||||||||||||||||||||
Sbjct: 121  tatgaagacagtgatgatgattatgattaga 151